Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00560 ATGCAGACTCTGGGTTTGTTGGTCGCTCCTGTTCTCGGTTTCTACCAGAGGTTCCTTCGTTTCTCTCTCCGCTTCCTTCTTCTCATGTTCATGGATTTCCCTTCCACGTTCAAGTTCATCACCCAAGCCAGTGAACTCGGTTGCGGCTTCCTCCTCCTCGGTTACTTCTCGCGTCTCTTCAACCTCCTCGGCCTCCTCTTGATCTTCTTCTTCTGCCTCAGGTTTCTCCGCTCTCCTCTTCTCCTCTCCAACCACGAGAAATCGTCGTCGTCCAGAGACGAGAATTCCAAGGAAGAAGAGAGTTTGGAGGACGAGGTGTTCGACGTAATGTCGCTGAGGAAGATGGTGAAGGAGGAGCGGCAGCGGTACAACGCGGCGTGCGCGGAGATCGAGCAGGAGCAGGGGGCGGCGGCGTCCGCGGCGGAGGAGGCCATGGCCATGATTCTGCGGCTGCAGAGCGAGAAGAGCGCCGTGGAGATTCAGGCCAAGCAATTCCGGCGCGTGGTGGAGCAGAAGCAGGAGTACGATCTCGAAGTGATCGAGTCGCTCCGGTGGACAGTAGTGCAGGTGGAGTCGCAGAAGAACCTTCTAGAACGTCAGTTAGGGGTTTTGAGGGAGAGGCTTAGACAGTTCGTCAATGATCAAGAAATACAGCAGCTTCAAGAAGAACAAGAACTACAAGGCACAGCCAGTGATGATGATGATGATGGTGATGAAGATAGCAGTGGATTCTTGAATTTCTCAATTGAATATGATGATGTAGATGCTTCTTCTTCTAGCAACCACTCACCCACACACACACCACAGCACTTGTAA 816 0.5294 MQTLGLLVAPVLGFYQRFLRFSLRFLLLMFMDFPSTFKFITQASELGCGFLLLGYFSRLFNLLGLLLIFFFCLRFLRSPLLLSNHEKSSSSRDENSKEEESLEDEVFDVMSLRKMVKEERQRYNAACAEIEQEQGAAASAAEEAMAMILRLQSEKSAVEIQAKQFRRVVEQKQEYDLEVIESLRWTVVQVESQKNLLERQLGVLRERLRQFVNDQEIQQLQEEQELQGTASDDDDDGDEDSSGFLNFSIEYDDVDASSSSNHSPTHTPQHL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00560 271 MobiDBLite consensus disorder prediction 224 247 - -
Gma15g00560 271 ProSiteProfiles GTD-binding domain profile. 107 205 IPR007656 -
Gma15g00560 271 Coils Coil 180 214 - -
Gma15g00560 271 Pfam Zein-binding 111 201 IPR007656 -
Gma15g00560 271 PANTHER ZEIN-BINDING PROTEIN 3 270 - -
Gma15g00560 271 PANTHER BNAANNG28530D PROTEIN 3 270 - -
Gma15g00560 271 Coils Coil 113 133 - -
Gma15g00560 271 MobiDBLite consensus disorder prediction 227 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00560 Gma-Chr15 4636008 4636823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00560 - - gmx:100784633 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00560 15 4636008 4636823 Gma13g02278 13 37602561 37610482 GST
Gma07g01787 07 39005027 39007185 Gma15g00560 15 4636008 4636823 PCT
Gma08g00625 08 5200878 5202185 Gma15g00560 15 4636008 4636823 PCT
Gma15g00560 15 4636008 4636823 Gma07g01787 07 39005027 39007185 PCT
Gma15g00560 15 4636008 4636823 Gma08g00625 08 5200878 5202185 PCT