Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00558 ATGGCAAATTCTCATTTATCAACACCTTCTGAGCTATTTTCAAGACAACATAAGCCCCCTAGGGTTCCAAATCTTATTGGGGGCAGTTTTCTGGACTCAAAATCGTTAACTTTCATTGATGTTATCAACCCTGCAACACAAGAGGTTGTTTCACAAGTTCCTTGCACCACAGATGAAGAGTTTAAAGCTGCGGTATCTGCAGCAAAGAAGGCATTTCCATCATGGCGAAAAACTCCAATCACAAAACGCCAACGTGTTATGTTGAAGTTCCAGGAGCTTATACGCAGAGATATGGATAAACTTGCCCTGAATGTGACCACTGAACAAGGAAAGACGTTAAAGGATGCACAAGGAGATGTTTTCCGTGGTTTAGAGGTGGTTGAACATGCTTGTGGGATGGCAACTCTACAAATGGGAGAATATGTTTCTGATGTATCAAGTGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTATGTGCTGGTATTTGTCCATTCAATTTTCCTGCAATGATTCCCTTGTGGATGTTCCCAGTGGCAGTTACATGTGGCAACACCTTTATTCTAAAACCATCAGAGAAAGTTCCAGGTGCCTCTGTAATGCTTGCAGAATTGGCAATGGAAGCTGGTTTGCCTGAGGGTGTCTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGTGACGATGATGACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATGCTAGAGCTGCAGCTAAAGGGAAACGTGTTCAGGCTAATATGGGGGCCAAAAATCATGCAGTTGTAATGCCTGATGCTAGTGTTGATGCTACTGTAAATGCTTTAGTTGCTGCAGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCACTGTTGTTTTTGTTGGAGACTCAAAACTGTGGGAAAGTAAACTTGTGGAGCATGCCAAAGCTCTTAAAGTAAATGTTGGAACTGAACCTGATGCAGACCTTGGTCCAGTCATTAGCAAACAGGCAAAGGAGCGAATACACCGATTAATTCAATCTGGGGTTGAAAGTGGTGCCAGACTAGTTCTTGATGGAAGAAATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTATCAGATGTCACCGCCAACATGGAGTGCTACAAGGAGGAGATCTTTGGACCAGTTCTTCTTCTCACGGAGGCTGATAACTTGGAAGAGGCCATAAACATTATCAATGAAAACAAGTATGGAAACGGTGCTTCTATATTTACCACATCTGGTGTGGCTGCAAGGAAATTTCAGACCGAGATTGAGGCGGGGCAGGTGGGCATCAATGTTCCTATTCCAGTTCCTTTGCCCTTTTTTTCATTTACTGGCAACAAGGCATCATTTGCTGGCGATCTTAATTTCTATGGTAAGGCAGGGGTTAACTTTTATACACAGATCAAAACAGTAACCCAGCAGTGGAAGGATTCGGCCAGCGAAAGCAAGATTAATTTGGCTATGCCAACCTCTCAAAAATCTTGA 1554 0.426 MANSHLSTPSELFSRQHKPPRVPNLIGGSFLDSKSLTFIDVINPATQEVVSQVPCTTDEEFKAAVSAAKKAFPSWRKTPITKRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSDVSSGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKVPGASVMLAELAMEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYARAAAKGKRVQANMGAKNHAVVMPDASVDATVNALVAAGFGAAGQRCMALSTVVFVGDSKLWESKLVEHAKALKVNVGTEPDADLGPVISKQAKERIHRLIQSGVESGARLVLDGRNIVVPGYESGNFIGPTILSDVTANMECYKEEIFGPVLLLTEADNLEEAINIINENKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSASESKINLAMPTSQKS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00558 517 CDD ALDH_F6_MMSDH 22 498 IPR010061 GO:0004491
Gma15g00558 517 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 467 IPR016163 GO:0016620
Gma15g00558 517 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 517 IPR010061 GO:0004491
Gma15g00558 517 MobiDBLite consensus disorder prediction 1 20 - -
Gma15g00558 517 SUPERFAMILY ALDH-like 15 499 IPR016161 GO:0016491
Gma15g00558 517 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 24 498 IPR010061 GO:0004491
Gma15g00558 517 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 292 303 IPR016160 GO:0016491
Gma15g00558 517 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 41 475 IPR016162 GO:0016491
Gma15g00558 517 Pfam Aldehyde dehydrogenase family 31 494 IPR015590 GO:0016491
Gma15g00558 517 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 1 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00558 Gma-Chr15 4622042 4628792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00558 1 482 Aldehyde Dehydrogenase Gene Family AT2G14170 81.743 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00558 K00140 - gmx:100783569 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00558 15 4622042 4628792 Gma15g00558 15 4622042 4628792 ECH