Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00547 ATGGATGGTCACGGAGGAGGAGGAGGAGGGAGCAGAGGAGAAGCGGAGCTCTGGCTTTACACAGCGAACAAGGTTTTAAGCGCACGTGACCTGCACGGGGCCCGCTCATTTGCGATCCGGGCTCGAGACTCCGACCCGAGATACGAGCCCACTGAGCTCCTTTTAGCGGTGATTGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCAACTGGACTGGTACGCTATTTTGCAAGTCCTCCGTTACACTCAGAACATCGACTACATCGCCGCCCAGTACCGCCGCCTCGCCACCCAACTCGACCCTCACCACAACCCCTTCGCCTTCGCCGCTCATGCCTTCACGCTCGTCCACGACGCGTGGACCGTACTCTCCAACCCAACTAAAAAGACTTTCTACGACAACCAACTCCGGCTCCTCACTCAACCCCCTCCTCCTCAGCCACCACCACCACCTCCCGCTCCTCCTGCCCCGGTGGCCTTCTTTCCTATTCAGCCGCCGCAACCGAACCTAAACCCCAACCCGATTCCGAACCTAGTCCCTCCAAGGGAAAGCCCTAGGCCTAGGCCTAGGGTAGAGGTGGAGCCGCCACCACCGGCACCGCCGCCATCGAGTCAGCTGGACAATGCGACCGAATTGACTCGGGCGAGTGAGGCCGAGAGCGAAGGGGCGAGTTTCTGGACCGCGTGCCCTTACTGTTACGTTATGTACGAGTATCCGAAGGTGTACGAGGATTGTACTTTGCGGTGCCAGAATTGTCGGAGGGGGTTTCATGCGATGGTTGTACGTTCTCCGCCAAAAGATGGTACTTTTGGCTCGTTTTGCAGTTGGGGTTTTTTCCCTGTGGGTTTTTCTGGGGATTTTAAGGACATTAACGGGTCTTCTTCCAAGTGGAACCCTTTCTCCCCTTTGTTTCCTTGCGCCTTGAAGGGGGCCGAGCAGAATAGTAGGTACCAGAAGGGGCCTTGGGTTTTTTACGATGATGACGCGTCTGCGGAGTTCGTCGAGGCTGGTTCCGACACGACGGAAGATGATTCCGATGATGATGACTGGCGTGGCGGGAATCAGAAGGGGACCACGAGGAGGAGGAAAAGAAGGAAGAGGAGAAGCAATGCTGGTGGTGATGTTAGAAGGGTACCTACAATTGAGAGGCCTAGAAGACGGGTTCAGAATAGTGACGGTAATGACAGTGTGGGGAATGGTGAGGCTGTGGATGGTGGTGCCCTTGCCGTGCCGGTGGCACCGGAGTCTAGCAAGAAGGCTGTGGCGTTGGGTGGATCAAGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTGGATTTAAATGTTGAGTTTAGCAATGAGGTGGAGGAGCCTGTGCATGGAGCAGGTGAAGGGAATGGGAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGGCTGGATGAGTTCCTTAGTAGCTTGCCTATTCTCAATGTTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1494 0.5542 MDGHGGGGGGSRGEAELWLYTANKVLSARDLHGARSFAIRARDSDPRYEPTELLLAVIDTLMAGEARINDQLDWYAILQVLRYTQNIDYIAAQYRRLATQLDPHHNPFAFAAHAFTLVHDAWTVLSNPTKKTFYDNQLRLLTQPPPPQPPPPPPAPPAPVAFFPIQPPQPNLNPNPIPNLVPPRESPRPRPRVEVEPPPPAPPPSSQLDNATELTRASEAESEGASFWTACPYCYVMYEYPKVYEDCTLRCQNCRRGFHAMVVRSPPKDGTFGSFCSWGFFPVGFSGDFKDINGSSSKWNPFSPLFPCALKGAEQNSRYQKGPWVFYDDDASAEFVEAGSDTTEDDSDDDDWRGGNQKGTTRRRKRRKRRSNAGGDVRRVPTIERPRRRVQNSDGNDSVGNGEAVDGGALAVPVAPESSKKAVALGGSRRRSERNLGKLDLNVEFSNEVEEPVHGAGEGNGNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00547 497 SUPERFAMILY Chaperone J-domain 67 139 IPR036869 -
Gma15g00547 497 MobiDBLite consensus disorder prediction 142 186 - -
Gma15g00547 497 Pfam DnaJ domain 73 135 IPR001623 -
Gma15g00547 497 ProSiteProfiles dnaJ domain profile. 73 138 IPR001623 -
Gma15g00547 497 CDD DnaJ 73 127 IPR001623 -
Gma15g00547 497 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 8 497 - -
Gma15g00547 497 MobiDBLite consensus disorder prediction 359 373 - -
Gma15g00547 497 MobiDBLite consensus disorder prediction 338 413 - -
Gma15g00547 497 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 497 - -
Gma15g00547 497 MobiDBLite consensus disorder prediction 139 219 - -
Gma15g00547 497 Gene3D DnaJ domain 67 143 IPR036869 -
Gma15g00547 497 SMART dnaj_3 72 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00547 Gma-Chr15 4525637 4527366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00547 14 496 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.563 6.95e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00547 - - gmx:100778926 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00547 15 4525637 4527366 Gma13g02293 13 37720752 37722242 GST
Gma07g01768 07 38830469 38832079 Gma15g00547 15 4525637 4527366 PCT
Gma15g00547 15 4525637 4527366 Gma07g01768 07 38830469 38832079 PCT