Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00540 ATGGGAGTGGAGAAGCAGTTGTTGAGGTCTGGCACCGGTCCGAAGCCAATTCCCGGTCAGAACGTAACCGTTCACTGCACTGGTTTCGCAGGGAAGAACGGTGACCTTTCTCAGAAATTCTGGAGCACAAAGGATCCTGGCCAGAACCCATTCACTTTCAAAATCGGCCAAGGTTCTGTTATCAAAGGATGGGATGAAGGTGTGCTTGGCATGCAAATTGGTGAAGTTGCTCGTCTCCGGTGCTCTCCGGATTATGCTTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACGGCCCAACTCTGTCTTGGAATTTGAAATCGAAGTCTTAAGTGCGCAATGA 342 0.5029 MGVEKQLLRSGTGPKPIPGQNVTVHCTGFAGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVLGMQIGEVARLRCSPDYAYGAGGFPAWGIRPNSVLEFEIEVLSAQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00540 113 SUPERFAMILY FKBP-like 2 111 - -
Gma15g00540 113 MobiDBLite consensus disorder prediction 1 20 - -
Gma15g00540 113 Gene3D - 1 113 IPR046357 GO:0003755
Gma15g00540 113 PANTHER PEPTIDYLPROLYL ISOMERASE 1 112 - -
Gma15g00540 113 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 112 - -
Gma15g00540 113 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 110 IPR001179 GO:0003755
Gma15g00540 113 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 113 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00540 Gma-Chr15 4488812 4490093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00540 2 111 Calmodulin-binding Proteins AT5G48570 39.640 1.79e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00540 K01802 - gmx:100500283 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00540 15 4488812 4490093 Gma13g02300 13 37761351 37763303 GST