Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00539 ATGGTGTGCCAAGCAGCAAGCCAAACAAGATTCCGGGCTTTGAAACATGAGAGTGGCATTAAAGGTGAACCAGCAATTATTGTTAGAGTGATAGCATGCTTTCAACCTTTGCACGATTGTCAGGCTGAGTACTTCCGCCATTTGCTTAAGCCTGTAACAGAAGCAGCAAGTCATTCAAGATCCCATATCAAGGCACTGGTCATTTTATTTGTTGAATGGTTAAGGATCACAGAGCCCAGTTCGCAGGTTCATTCAGCTTATATGAACCCCAGCACATGCATCTTTCCTGCTGTCAGCGTGTTTCCAGGATTCACAGCTCCTGCTCTCCCAAACTGGAAGACTGAGCAGACCAATGAAGTGCATGGGTTCCATCAGTATCCTCATTCAGAACCATATTTGAAAGAAACACATACTGGAGGGGCTATGCAAAATGCAAATCATGCATCTTTCCAGAAGAAGTTACTTATTTTTGACCACTCTGGTAGTAAGACAAGGATGCTTTATAGTCCTGTCTTCTCTCTTGTCCAAAGTCCAACTGTTACTGCTACAAAATTTGCTCAAGTTTATCATGTAAACATGGAAGCACAGGCAACTAATATGGGCCAAAAGCATTTACCCATATACACTTCACCCGAAGAGACTGGTAAAGATCATATAGACAATGAAGAAAGTGAAATGCATGAAGACACagaagaaatcaatgcattgctttattctgatgatgatgatgatgatgAGGTAACAAGTACTGGTCATTCTCCATTGGTTACAAAAAGAACTTATGTGATGCAAGAACAGTTTGCAGGCATGAAGAAGGAGGTTGCTGGCTCTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATAGTGGATACAATACACTACCACCACTCATGGACAGTGCTAGTTCCGAAAGGCTAAATGAAATGTGCGAGTATGCCAGTGATGCTGAATCAAAGTATTCTAGTAGTGGCGGGGTGTATGCTGCAAGGCAAACTAAAGAAGATAATCCAACACCTGCTGATATTCAATTGAAAAAGGATAAAATCCGTGAATTGTTGAGAGTTCTCGAGAACTTTATTCCTGGAGCAAAAGGAAAGCATCCCCTGTTAGTCATTGATGGTACTATTGAGTACTTGAAATCTTTGGCGTCCCAAGCTGGTACACTGAAATATCACTAA 1179 0.4012 MVCQAASQTRFRALKHESGIKGEPAIIVRVIACFQPLHDCQAEYFRHLLKPVTEAASHSRSHIKALVILFVEWLRITEPSSQVHSAYMNPSTCIFPAVSVFPGFTAPALPNWKTEQTNEVHGFHQYPHSEPYLKETHTGGAMQNANHASFQKKLLIFDHSGSKTRMLYSPVFSLVQSPTVTATKFAQVYHVNMEAQATNMGQKHLPIYTSPEETGKDHIDNEESEMHEDTEEINALLYSDDDDDDEVTSTGHSPLVTKRTYVMQEQFAGMKKEVAGSDWPNKRQKLIDSGYNTLPPLMDSASSERLNEMCEYASDAESKYSSSGGVYAARQTKEDNPTPADIQLKKDKIRELLRVLENFIPGAKGKHPLLVIDGTIEYLKSLASQAGTLKYH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00539 392 PANTHER TRANSCRIPTION FACTOR BHLH145 79 391 IPR037546 -
Gma15g00539 392 PANTHER TRANSCRIPTION FACTOR SAC51 79 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00539 Gma-Chr15 4480612 4482245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00539 149 382 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G64340 38.306 7.29e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00539 - - gmx:100778385 635.565