Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00519 ATGGAAGCATCATTGAAGTTGGAGTCCCTTGCGTGCATAGACTCCACCACTCTCTCTCACTCAGAGCTCCTCGCTCTTTCTCTCTCCTCTCTATGCTCCACCCATGATCTCCTCACTCCCAATATCGACCCCGCTCTCTTCAACCAGAGCACCGGCTCCCTCCGCCAGACCTACTCCCTCCCCCACTCCTCCCCTACCGCCCGCCGCCGCCGCCGCCTCGCCGGCCTCCTCCCTTCCCCCAAGCTCCCTCCCCTCCCCGCCCACGACCCCGAAAACGCCGAGAACCGCCTCATCATCGACTACCTCAAACAGTTCATCAGAGACGACCCCAATTTCGACCAAGTCGAACTCGCTCCCCCTTCCCTCCCCCAACCGAGAATCCAGAGGAAGCGTGGCAGAAATCCCAAAGTCAAAGTCCACTTGGATGACTGCTACCGCGGCATCGACATTGTTAACCAAAACGGCGTCTCTGTCGATCTCCAACTGTTGGCCAACTCCCAAGACCCCTTCGCCGAGGAACTCAAGAGACGCACCGAGGGTTTGCACAACGAAGAGGAGCTGTTAGGGTTTCTGAGGGACTTGCCGGGCCAGTGGGGGAGCCGGAGGAAGAAGCGCAGGATCGTCGACTCTGCGGATTTCGGCGACGTCTTGCCGCTTAGCTGGAAGATTCTCCTCGGTTTGAAGAGAAAGGATGGTCGCGCATGGATCTATTGCCGCAGATACATTAGCCCCAGTGGACAGCATTTTGTGTCTTGCAAAGAGGTTTCTTCCTATCTGCAGTCTCTTTTGGGTAATGGTGATGCACAGTTGCAAATTAGTCGGAGGACTGAAAATGTAGTGCAAGAACACAAATTGTCTGCCGATAATTCTGCAGCTGTTACCAAGGAGCATCAAGATGAGATGCAGATTGTTGCTGTGAACATGGCTGTGTCTGGTTTGTCTGCTGCTAATGAGCGAGTGAAGGAGGTTGCCTTGTTGGGGATTGAAAATCTTGCGGATGTGCAGATTCATGACCTGTTGGAATGTCGCAAGTGCAACATGAGCTTCAATGAGAAGGATTTGTACTTGCAGCACCTGTTGTCCTTTCACCAGAGGACGACAAGGCGGTACCGGCTTGGTTCGTCTGTTGGAGATGGAGTTATAATTAAGGATGGCAAGTTTGAGTGCCAGTTCTGTCATAAGGTGTTTCTTGAAAGGCGTCGCTACAATGGTCATGTGGGGATCCATGTTAGGAATTATGTGAGGAAAGTTGAAGATTCACCGGGTCAGCCAAATGTCCAGGGGACAGACGACAAGTCTCCAGTCAGGGAGGACTTTCCTTTAAGGATATCTAAGATGGATGCCCTCATTGAAATTGCTCAGAACTCTATTATGGAGGATACTGTCACTGAACCCCATAGTTCAGCTAAACTGAATAGGATTCCTGGTTCAGATGCTGTTGGTTACTTAGATCAAGATGGAAACTCTGAGTCTCCAGTCAGTGAACAGCAAATGGAAGATAGCATGACTGGAAAAAATGTGGATCATGATTTGGATGAAAAAGTAGAGGAAATTGACGATGATAACCATGCGATTGATGTAAAGATGGTTACTTTTCTGGATAACATGGGTTTGTTATCTGTAAATAACCAAGATGTTAATGCACCTGAGACTTCTTAG 1659 0.5015 MEASLKLESLACIDSTTLSHSELLALSLSSLCSTHDLLTPNIDPALFNQSTGSLRQTYSLPHSSPTARRRRRLAGLLPSPKLPPLPAHDPENAENRLIIDYLKQFIRDDPNFDQVELAPPSLPQPRIQRKRGRNPKVKVHLDDCYRGIDIVNQNGVSVDLQLLANSQDPFAEELKRRTEGLHNEEELLGFLRDLPGQWGSRRKKRRIVDSADFGDVLPLSWKILLGLKRKDGRAWIYCRRYISPSGQHFVSCKEVSSYLQSLLGNGDAQLQISRRTENVVQEHKLSADNSAAVTKEHQDEMQIVAVNMAVSGLSAANERVKEVALLGIENLADVQIHDLLECRKCNMSFNEKDLYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEDSPGQPNVQGTDDKSPVREDFPLRISKMDALIEIAQNSIMEDTVTEPHSSAKLNRIPGSDAVGYLDQDGNSESPVSEQQMEDSMTGKNVDHDLDEKVEEIDDDNHAIDVKMVTFLDNMGLLSVNNQDVNAPETS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00519 552 ProSitePatterns Zinc finger C2H2 type domain signature. 389 409 IPR013087 -
Gma15g00519 552 ProSitePatterns Zinc finger C2H2 type domain signature. 342 363 IPR013087 -
Gma15g00519 552 Gene3D Classic Zinc Finger 332 412 - -
Gma15g00519 552 SMART c2h2final6 340 363 IPR013087 -
Gma15g00519 552 SMART c2h2final6 387 409 IPR013087 -
Gma15g00519 552 PANTHER METHYL-CPG-BINDING DOMAIN PROTEIN 3 552 - -
Gma15g00519 552 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 3 552 IPR037472 -
Gma15g00519 552 SUPERFAMILY DNA-binding domain 213 262 IPR016177 GO:0003677
Gma15g00519 552 ProSiteProfiles Zinc finger C2H2 type domain profile. 387 414 IPR013087 -
Gma15g00519 552 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 207 279 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00519 Gma-Chr15 4330035 4334816 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma15g00519 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00519 - - gmx:100526917 848.195