Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00516 ATGGATTGTTTCTGTTGCTTCAACAATCAGGCGGTACGCACTTCATGTAGCTCTGGCAAGGGCAAGAGCCATCAGGGCTCAGTTAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAAATCGTCAAGCTTGTAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGTGTGCCTGCCTATTTACAAAAGCATCTCTTTTCTAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCAGCCAGTTCCATCATTAAAGCCTATGAGACAACAGATCAGACCATTCTTTCTCATAGTTCTGATTTGGGGCAAGGAGGATCGACTGCAGTGACTGCAATTCTTATTAATAATCAGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTTTGTCAAGGAGAGGGGTGGCTGAACAGATGACTATTGATCATGAGCCCAATACCGAGAGGGGCATCATTGAGAACAAAGGTGGCTTTGTCTCAAACATGCCAGGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATCTAAAATCACACTTACGATCTGATCCTGATATACGATATGTTGATATTGACCTAGATGCTGAGCTTTTGATACTTGCCAGTGATGGTCTTTGGAAGGTAATGGCAAACCAAGAGGCAGTTGATATTGCACGAAGGATAAAAGATCCACAAAAGGCAGCTAAACAACTAGTTGTCGAGTCATTGAACAGAGAGAGTAAGGATGATATTTCGTGCATTGTAGTTCATTTCAAGGGATGA 837 0.4277 MDCFCCFNNQAVRTSCSSGKGKSHQGSVKYGFSLVKGKANHPMEDYHVAKIVKLVGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPASSIIKAYETTDQTILSHSSDLGQGGSTAVTAILINNQKLWVANVGDSRAVLSRRGVAEQMTIDHEPNTERGIIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRYVDIDLDAELLILASDGLWKVMANQEAVDIARRIKDPQKAAKQLVVESLNRESKDDISCIVVHFKG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00516 278 SMART PP2C_4 25 274 IPR001932 -
Gma15g00516 278 ProSiteProfiles PPM-type phosphatase domain profile. 29 276 IPR001932 -
Gma15g00516 278 SUPERFAMILY PP2C-like 25 277 IPR036457 -
Gma15g00516 278 PANTHER PROTEIN PHOSPHATASE 2C 7 277 IPR015655 GO:0004722|GO:0006470
Gma15g00516 278 Gene3D - 24 278 IPR036457 -
Gma15g00516 278 CDD PP2Cc 28 276 IPR001932 -
Gma15g00516 278 Pfam Protein phosphatase 2C 39 269 IPR001932 -
Gma15g00516 278 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 7 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00516 Gma-Chr15 4297397 4302319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00516 1 277 PP2C-type Phosphatase Gene Family AT1G22280 67.944 1.53e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00516 K17506 - gmx:102667117 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01179 05 33447005 33455510 Gma15g00516 15 4297397 4302319 PCT
Gma08g00678 08 5611077 5619652 Gma15g00516 15 4297397 4302319 PCT
Gma15g00516 15 4297397 4302319 Gma05g01179 05 33447005 33455510 PCT
Gma15g00516 15 4297397 4302319 Gma08g00678 08 5611077 5619652 PCT