Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00515 ATGGCGGAGGGTGCTTCTTACGGATTGCGTCGTCCATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGATGGTTGCGACCTGCAGAAATTTGTGAAATTCTTCGTAATTATCGGATGTTTCATATCACATCAGAACCTCATAACAGGCCACCAAGTGGTTCACTTTTTCTTTTTGATCGAAAGGTTTTGAGATACTTTAGAAAGGATGGGCATAATTGGAGAAAGAAAAAAGATGGAAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGTTGGAAGTGTTGATGTGTTGCACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAAAGGCGAAGCTACTGGATGCTTGAACCGGATATGATGCACATAGTATTTGTCCATTACTTGGAAGTTAAGGGTAACAAAAATATTGTTGTAAATAATGAAGGTGATGAAGTCCCAACAGATTCCCAAAAGGTAACTTCTCCATCGTCTAGCCTTCCCACACATCATAGCTGTGTTTCTTCACTGAGTACAGATTCCGTGAGCCCAACAACCAGTTTGATGTCTTTACATGAAGATGCTGATTCTGAGGATATCCACCATGCAAGTTCTGGGTTGCACCCATTACATGAGTCACAACATAGTGGGAATAGTCCATTGACGGAAAAGATTGGTGCTGGTTCGAACAGTTCATATCTTATGCATCCCTTTTCAGGTGATAATGAACAGTCATCAATTTCTGGAACGGATTATGTCCCTGTTGTTCATGGGGATAAATTTAGAGGAAATGATACTGCTTATACTGATGGTCAGAAACCGCATGGCATGGCACCATGGGGCACTGTCTTGCAAAGCACTGCCAAATTGCACAATGATCCTTCTCTTGCATCATTTCCTTCCATCCTACCTAGTTCAATGGGAGACGTCCTTGAACAAGAACATACCATTTTTGGTGACCTTTTAATGAGCAAAAGTGGTCTCACTGAGGAAGCAGAGAGTTCTCAGTCTCTCCAATCAAATTGGCAGATTCCTTTTGAAGACAATTCAGGAGGCATGCCAATGTTAACCCAAACCCAATCATTTGGTCTGCAATTTAGATCTGATTATGGCACCGGTTTACTAGGGAACGAAACTCGTAATGCAAGTTCTGAAATTGCTCCGATCCTGTACAGTTTTCATGGTGAACCAAAAGAGCAGCCTATGCAGCAAAACTATCCACAAGAGCTTGAAGATGGACAATCTCAACATGCACTAAAATCCAATTCTGCAAATAAAGTTCCTGATGAAGAAACTATCAACTATGGCTTAACAGTGAAGAGCACATTATTGGACAGAGACGAGAGCCTGAAGAAGGTTGATAGCTTCTCTCGGTGGATTACTAAGGAACTTGGAGAGGTGGCTGATTTGAATATGCAGTCCTCACCTGGTATTTCATGGAGTACAGATGAATGCCAGCATGTGATAGATGATACCTCATTGAGCCCATCTCTCTCTCAAGACCAACTGTTTAGTATAAATGATTTTTCACCTAAATGGGCTTATGCTGAGTCTGAAATTGAGGTGTTGATTATTGGATCATTTTTGAAGAGTCAACCAGAGGTGACAACCTGTAACTGGTCCTGTATGTTTGGGGAAGTTGAGGTTCCTGCTGAGGTCTTAGCTGATGGAATTTTGTGCTGTCAAGCTCCTTGTCATAAGGTTGGACGGGTCCCTTTCTATGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGGGAATTCGATTTCAGAGAGGGCTTTGCTAGAAATGTAGATTTTGCAGATTTTTATATCAGTTCAACTGAAATGCTGCGTCATTTGAGACTGGAGGATTTTCTTTCTTTAAAGCCAGTGGACCCTTCAAATCATTCTTTTGAGGGTGATATGGAGAAAAGAAACTTAATTTTTAAGCTCATTTCACTGAGAGAGGAGGAGGACTATTCAATTAAGGATGAAGTTACTAGAGAATTGGATATATCCCAACACATGGTGAAGGAGCATCTGTTTCACAGGCAGTTTAAAGAGAAGCTGTACTCATGGCTTCTTCACAAAGTAACTGAGAATGGTAAAGGGCCAAATGTATTAGATGAGGATGGGCAAGGTGTTCTACATTTAGCAGCTTTTCTTGGTTATGATTGGGCCATAAATCCAATTATATCTGCTGGAGTTAATATCAACTTCCGAGATGTGAATGGATGGACAGCTCTTCATTGGGCTGCATCCTGTGGCAGAGAGCGGACAGTTGCTGTCCTTGTCTCCATGGGTGCAGATTGTGGAGCACTGACAGATCCATCTCCCGCATTTCCATCTGGTAGAACAGCTGCAGATCTTGCCTCTAGCTATGGGCACAAAGGAATTTCTGGTTTTCTTGCTGAGTCTTCATTAACTCACCACCTCGAAACCCTCACAATGGATGATCAAAAAGGTGGTCAGCAAGAAATTTCAGGAATGAAGGTGGTGCAGACAGTTTCAGAACGATCTGCAACACCTGTGCACTATTGTGATATCCCAGATGCCATCTGCCTCAAGGATTCACTTACTGCTGTGCGTAATGCAACACAAGCTGCTGATCGTATACATCAAGTATACAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAGTATGAAGGTGATGATGAGCTTGGATTGTCAGATCAGCAAGCTCTTTCTCTGCTAGCTTCCAGGGCATGCAAATCTGGACAAGGGGATGGTTTAGCCAATGCTGCTGCAGTACAGATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATGATTCGTCAAAGAGTTGTTAAAATCCAGGCCCATGTTAGAGGTCACCAGGTAAGGAAACAGTATAAACCAATCATATGGTCTGTGGGAATCCTGGAGAAGGTCATATTACGTTGGAGGCGCAAGGGTAGCGGTTTACGTGGATTTCGACCAAATGCCATTAATAAAGTCCCCAATCAACAAAATGATTCTCTGAAAGAGGATGATTATGATTATCTCAAGGAGGGACGGAAACAAAAGGAAGAAAAGATCCAAAAGGCCCTATCAAGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGTGCTCAATACCGGCGTCTGCTAAATGTTGTTGAGGACTTCCGTCAAACCAAGGCATCTAACAAGGGTTTGATCAATTCTGAAGAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGATATGCTTTTAGACGATGATAATTTCATTCCTATAGCATTTGATTGA 3267 0.4187 MAEGASYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPHNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNKNIVVNNEGDEVPTDSQKVTSPSSSLPTHHSCVSSLSTDSVSPTTSLMSLHEDADSEDIHHASSGLHPLHESQHSGNSPLTEKIGAGSNSSYLMHPFSGDNEQSSISGTDYVPVVHGDKFRGNDTAYTDGQKPHGMAPWGTVLQSTAKLHNDPSLASFPSILPSSMGDVLEQEHTIFGDLLMSKSGLTEEAESSQSLQSNWQIPFEDNSGGMPMLTQTQSFGLQFRSDYGTGLLGNETRNASSEIAPILYSFHGEPKEQPMQQNYPQELEDGQSQHALKSNSANKVPDEETINYGLTVKSTLLDRDESLKKVDSFSRWITKELGEVADLNMQSSPGISWSTDECQHVIDDTSLSPSLSQDQLFSINDFSPKWAYAESEIEVLIIGSFLKSQPEVTTCNWSCMFGEVEVPAEVLADGILCCQAPCHKVGRVPFYVTCSNRLACSEVREFDFREGFARNVDFADFYISSTEMLRHLRLEDFLSLKPVDPSNHSFEGDMEKRNLIFKLISLREEEDYSIKDEVTRELDISQHMVKEHLFHRQFKEKLYSWLLHKVTENGKGPNVLDEDGQGVLHLAAFLGYDWAINPIISAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGADCGALTDPSPAFPSGRTAADLASSYGHKGISGFLAESSLTHHLETLTMDDQKGGQQEISGMKVVQTVSERSATPVHYCDIPDAICLKDSLTAVRNATQAADRIHQVYRMQSFQRKQLTQYEGDDELGLSDQQALSLLASRACKSGQGDGLANAAAVQIQKKFRGWKKRKEFLMIRQRVVKIQAHVRGHQVRKQYKPIIWSVGILEKVILRWRRKGSGLRGFRPNAINKVPNQQNDSLKEDDYDYLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKASNKGLINSEETVDGVEDLIDIDMLLDDDNFIPIAFD 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00515 1088 MobiDBLite consensus disorder prediction 148 176 - -
Gma15g00515 1088 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Gma15g00515 1088 ProSiteProfiles Ankyrin repeat region circular profile. 736 762 - -
Gma15g00515 1088 SMART CG_1_2 18 136 IPR005559 GO:0003677
Gma15g00515 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 912 962 IPR027417 -
Gma15g00515 1088 Pfam IQ calmodulin-binding motif 914 932 IPR000048 GO:0005515
Gma15g00515 1088 Pfam IQ calmodulin-binding motif 937 956 IPR000048 GO:0005515
Gma15g00515 1088 SMART iq_5 911 933 IPR000048 GO:0005515
Gma15g00515 1088 SMART iq_5 934 956 IPR000048 GO:0005515
Gma15g00515 1088 Gene3D - 675 867 IPR036770 -
Gma15g00515 1088 SMART ANK_2a 703 732 IPR002110 GO:0005515
Gma15g00515 1088 SMART ANK_2a 775 804 IPR002110 GO:0005515
Gma15g00515 1088 SMART ANK_2a 736 765 IPR002110 GO:0005515
Gma15g00515 1088 SUPERFAMILY Ankyrin repeat 690 797 IPR036770 -
Gma15g00515 1088 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Gma15g00515 1088 Pfam IPT/TIG domain 503 577 IPR002909 -
Gma15g00515 1088 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 1 1088 - -
Gma15g00515 1088 Gene3D - 912 958 - -
Gma15g00515 1088 ProSiteProfiles Ankyrin repeat profile. 703 735 IPR002110 GO:0005515
Gma15g00515 1088 Gene3D Immunoglobulins 496 591 IPR013783 -
Gma15g00515 1088 Pfam Ankyrin repeats (3 copies) 708 797 IPR002110 GO:0005515
Gma15g00515 1088 ProSiteProfiles Ankyrin repeat profile. 736 768 IPR002110 GO:0005515
Gma15g00515 1088 ProSiteProfiles IQ motif profile. 912 941 IPR000048 GO:0005515
Gma15g00515 1088 ProSiteProfiles IQ motif profile. 935 959 IPR000048 GO:0005515
Gma15g00515 1088 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 1088 - -
Gma15g00515 1088 SUPERFAMILY E set domains 503 588 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00515 Gma-Chr15 4282205 4292905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00515 1 1069 CAMTA Transcription Factor Family AT5G64220 53.254 0.0 1086
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gma15g00515 Ank_2 1.2e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00515 K21596 - gmx:100818124 2169.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01181 05 33470775 33481137 Gma15g00515 15 4282205 4292905 PCT
Gma08g00680 08 5628634 5639899 Gma15g00515 15 4282205 4292905 PCT
Gma15g00515 15 4282205 4292905 Gma05g01181 05 33470775 33481137 PCT
Gma15g00515 15 4282205 4292905 Gma08g00680 08 5628634 5639899 PCT