Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00504 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTGGCCTCTGCTATTGGAGGCAAAGTTGGTGCTGCTGTTACTGTTAATCCCAGAAGACTCATTGTGGTAGCTGCTGCTGCACCAAAGAAGTCATGGCTCCCTGGTGTTAGAGGTGGTGGCAATCTCGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTATGGTTTTGATCCACTAGGCCTTGGGAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATTCATGGGAGGTGGGCAATGGCTGCAGTTCTAGGAATCTTTGTGGGGCAGGCATGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCAAATGCAATTGCTCCTTTCTCCTTTGGTACTCTTCTGGGAACCCAGTTGATCCTCATGGGGTGGGTTGAGAGCAAGAGATGGGTGGATTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCTGAGAACTTTGCCAATGCCACTGGTGAGCAAGGCTACCCAGGAGGCAAATTCTTTGACCCTTTGAGCTTTGCTGGCACTATCAAGGATGGAGTTTACATTCCGGATACAGAGAAGCTGGAAAGATTGAAATTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTGGCCATGCTGATTTTCTACTTTGAGGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTGTAA 783 0.5045 MAAATSGAVLNGLGSSFLSGGNRSQTLLASAIGGKVGAAVTVNPRRLIVVAAAAPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLSFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00504 260 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 260 - -
Gma15g00504 260 SUPERFAMILY Chlorophyll a-b binding protein 69 260 - -
Gma15g00504 260 Pfam Chlorophyll A-B binding protein 72 248 IPR022796 -
Gma15g00504 260 Gene3D Chlorophyll a/b binding protein domain 72 259 - -
Gma15g00504 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 260 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00504 Gma-Chr15 4205304 4206410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00504 1 260 Chloroplast and Mitochondria Gene Families AT1G15820 81.609 1.59e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00504 K08917 - gmx:100527463 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01199 05 33673712 33674886 Gma15g00504 15 4205304 4206410 PCT
Gma08g00699 08 5769492 5770870 Gma15g00504 15 4205304 4206410 PCT
Gma15g00504 15 4205304 4206410 Gma05g01199 05 33673712 33674886 PCT
Gma15g00504 15 4205304 4206410 Gma08g00699 08 5769492 5770870 PCT