Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00491 ATGGGAGATAACAATGTCAACCTTCCACCCGGGTTTCGATTTTATCCCACAGATGAAGAGCTTGTGGTCCATTTCCTTCACAGAAAGGCATCTCTTTTACCTTGCCACCCAGATGTCATCCCTGATCTTGAGGTCTACCCATATGATCCATGGGAACTTGATGGTAGAGCTTTAGCAGAGGGGAACCAATGGTACTACTACAGCAGAAGGACACAAAATAGGGTCACTGGAAATGGGTATTGGAAACCAACGGGAATAGAAGAACCAGTGGTTTCAAGCACAAGCAACAAGAGAGTTGGCATGAAGAAATATTTTGTGTTCCATGTGGGAGAAGCCCCTGCTGCTGGTATCAAAACCAATTGGATAATGCAAGAATATCGTCTATCAGATTCTTCTTCCTCTACCAGATCATCCAAAAGAAAATCACAACCAAAAATAGAATACAATAAATGGGTGATATGTCGTGTTTATGAGCGCAATGGCGACGATGATAATGGAACAGAGCTGTCGTGCTTGGATGAAGTATTCTTGTCATTGGATGATGATCTTGATGAAATTAGCTTACCAAATTATTAG 576 0.4184 MGDNNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLEVYPYDPWELDGRALAEGNQWYYYSRRTQNRVTGNGYWKPTGIEEPVVSSTSNKRVGMKKYFVFHVGEAPAAGIKTNWIMQEYRLSDSSSSTRSSKRKSQPKIEYNKWVICRVYERNGDDDNGTELSCLDEVFLSLDDDLDEISLPNY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00491 191 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Gma15g00491 191 PANTHER NAC DOMAIN-CONTAINING PROTEIN 104 5 186 - -
Gma15g00491 191 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Gma15g00491 191 PANTHER NAC TRANSCRIPTION FACTOR 56 5 186 - -
Gma15g00491 191 Pfam No apical meristem (NAM) protein 9 128 IPR003441 GO:0003677|GO:0006355
Gma15g00491 191 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00491 Gma-Chr15 4098643 4100029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00491 1 177 NAC Transcription Factor Family AT1G61110 40.306 4.36e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma15g00491 NAM 2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00491 - - gmx:100170712 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01212 05 33842997 33844714 Gma15g00491 15 4098643 4100029 PCT
Gma08g00714 08 5879928 5881044 Gma15g00491 15 4098643 4100029 PCT
Gma15g00491 15 4098643 4100029 Gma05g01212 05 33842997 33844714 PCT
Gma15g00491 15 4098643 4100029 Gma08g00714 08 5879928 5881044 PCT