Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00484 atgaagtgttgtttccggtcaagGTGTTCTCGTGTTGCTCGTAACAAAATGGTTGGAAGTGTTGACGCTTTGAATGAGGGTTTGAGAATCAACGGAGCAGTTGAACCGTTGCCTGAGGACTTTGATGCAACAGCTGTAATCATAGATCCCGTGCCTTCTGCAGTTGTAGACAATGGCATTCTGAAGGAGGAGGCGCAGATCAATAAAGGAAAAGAAAAAAGAGAAATAGTACTGGGAAGAAATGTTCATACCACATGTCTAGAAGTCACAGAGCCCGAGGCAGATGACGAGATCACTGGGGACCGGGAAGCTCATATGGCAAGTGTGTTGGCCAGATACAAAAGAGCCTTGACTGAAAGGACAAAGCACCATTTAGGCTACCCCTATAATTTGGatttcgattatggtgcactcacgcaacttcagcacttttccataaacaaccttggagatccatttattgaaagcaactatggtgtccactcccggcagtttgaagttggtgttttggattggtttgcccgattgtgggaactggagaaaaatgagtactggggctatataacaaactgtggtacagaaggcaatctccatggcatcctagttgggagagaggtctttccagatgggattttgtatgcctcacgggagtcacattattctgtgtttaaagctgctcgaatgtatagaatggaatgtgagaaggttgatactctttggtctggggaaattgattgtgatgatttcaaggccaagcttcttagtcaccaggataagccagcaattataaatgtgaacatagGTACAACTGTGAAAGGGGCTGTGGATGATCTTGATCTGGTCATAAAGAAACTTGAAGAAGCTGGATTTTCACATGAcagattctacatccattgtgatggggctttgtttggtctcatgatgcctttcgtgaaactaGCTCCAAAAGTTACTTTTAAGAAGCCTATTGGCAGTGTTAGTGTTTCTGGCCACAAATTTGTAGGGTGTCCCATGCCTTGTGGTGTGCAGATAACAAGATTGGAGTATGTAAATGCTCTTGCCAGGGATGTGGAATACCTTGCTTCTAGGGATGCCACGATCATGGGTAGTCGGAATGGCCATGCTCCCATATTCCTTTGGTATACCTTGAATCGGAAAGGATATAGAGGTTTTCAGAAAGAAGTACAGAAATGCTTGCGAAATGCCCACTACTTCAAAGGCCGCCTTGTTGAGGCTGGGATTGGTGCAATGCTTAATGAACTGAGCAGCACGGTTGTGTTTGAGAGGCCACATGATGAGGAATTTATACGCAAGTGGCAGTTAGCATGCAAAGGGAATATCGCACATGTGGTGGTGATGCCAAACATCACTATTGAGAAGCTTGATGATTTTCTGAACGAGCTTCTGGACAAGCGTGCTACCTGGTTTCAAGATGGAAAGGATCAACCTTACTGTATATCATCAGATGTAGGTGAAAAGAATTGCCTTTGTGCTTTGCACAAGTAA 1506 0.3001 MKCCFRSRCSRVARNKMVGSVDALNEGLRINGAVEPLPEDFDATAVIIDPVPSAVVDNGILKEEAQINKGKEKREIVLGRNVHTTCLEVTEPEADDEITGDREAHMASVLARYKRALTERTKHHLGYPYNLDFDYGALTQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECEKVDTLWSGEIDCDDFKAKLLSHQDKPAIINVNIGTTVKGAVDDLDLVIKKLEEAGFSHDRFYIHCDGALFGLMMPFVKLAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEYVNALARDVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYFKGRLVEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNITIEKLDDFLNELLDKRATWFQDGKDQPYCISSDVGEKNCLCALHK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00484 501 Gene3D - 139 383 IPR015421 GO:0003824
Gma15g00484 501 PANTHER - 17 501 - -
Gma15g00484 501 SUPERFAMILY PLP-dependent transferases 122 470 IPR015424 -
Gma15g00484 501 PANTHER SERINE DECARBOXYLASE 17 501 - -
Gma15g00484 501 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 325 346 IPR021115 GO:0016831
Gma15g00484 501 Pfam Pyridoxal-dependent decarboxylase conserved domain 211 420 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma15g00484 501 Gene3D Aspartate Aminotransferase, domain 1 384 472 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00484 Gma-Chr15 4059852 4063901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00484 K25193 - gmx:100785163 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00724 08 5940576 5943887 Gma15g00484 15 4059852 4063901 PCT
Gma15g00484 15 4059852 4063901 Gma08g00724 08 5940576 5943887 PCT