Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00474 ATGGTAGAAATGAGGGGCATATGTAATGTGTTGCATGGGTTGAAACCAGTGTTGCTGATGGTGTTAGTGCAAATTGCATATACTGCTGTCAATGTGCTTTTCAAGCTCGCCATAAACGACGGAATGAGCGTAAAGGTTGCCACAGCATATCGCCTCGCTTTTGGATCTGCTTTCACTGTTCCTCTCGCACTCATTTCTGAAAGGAACAAAAGACCAAAGATGACTTGGAGGGTGCTTTTCATGGCATGTCTTTGTGGCTTATTCGGGGGAAGTTTATTTCAAAACCTTTTCTATGAGTCCTTGGCTTTAACATCAGCAACGTTTGCGTCCGCTCTCTACAACCTCATTCCAGCCATTACCTTTGTCTTGGCCATCTCCTGCGGTTTCGAAAGGCTAAATTTGAAGGCAGCAGCAGGAAAGGCCAAGGTGTTGGGAACTTTACTTGGAATTGGAGGCGCAATGTTGTTGACCTTTATCAAAGGGGCAGAAATTAATATCTGGCCTTTCCACATCAACCTTATGCATCCACATCAGCACCAAAACGGCCAAGTGGCGTCATTAAATGCTGACTCTGGGAATAATAAATTGTTGGGGGCAATTTGCTCCCTAGCAAGCTGCTTCTCTTTTGCTTTGTGGCTCATCATTCAGGCTAAGATGAGCAAAGAATACCCTTGTCACTACTCAAGCACGGCTCTGATGTCTACAGCGGGAGCAATACAGGCCACTGCTTTTGGTTTCTGTTTTGAGAGGGATTTGACTCAATGGAAGTTGGGTTGGAATATTAGGCTACTGGCTGTGGCTTATTCGGGAATCGTGGCCTCTGGAATAGTGGTTATTATTACTGCATGGTGCATACAGATGAGAGGGCCTCTGTTTGCGTCTGTTTTCAACCCTCTAATGCTTGTGCTTGTGGCTATTACCGGTTCTTTGATGTTGAATGAGAACTTATACGTAGGAAGTGTGGTTGGAGCAGTGCTGATTGTGTGTGGGCTGTACATGGTTCTGTGGGGTAAAAGTAAAGAGATGAAAAATATTACTCAGTTGGTGCCATCAGAAACCATCCGAGAAGCTGAAGCCATAGAAGTTGTCGTCATGCCCATGTCCACACCAATAGATTATGAAAAATGTGACCAAAACAACCAAGGAGAAAGGAATGTTGACAAAGAACATTGTGACGATTTGACAAAAAACAAGGAAGATGATATTCGCATATAG 1215 0.4412 MVEMRGICNVLHGLKPVLLMVLVQIAYTAVNVLFKLAINDGMSVKVATAYRLAFGSAFTVPLALISERNKRPKMTWRVLFMACLCGLFGGSLFQNLFYESLALTSATFASALYNLIPAITFVLAISCGFERLNLKAAAGKAKVLGTLLGIGGAMLLTFIKGAEINIWPFHINLMHPHQHQNGQVASLNADSGNNKLLGAICSLASCFSFALWLIIQAKMSKEYPCHYSSTALMSTAGAIQATAFGFCFERDLTQWKLGWNIRLLAVAYSGIVASGIVVIITAWCIQMRGPLFASVFNPLMLVLVAITGSLMLNENLYVGSVVGAVLIVCGLYMVLWGKSKEMKNITQLVPSETIREAEAIEVVVMPMSTPIDYEKCDQNNQGERNVDKEHCDDLTKNKEDDIRI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00474 404 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Gma15g00474 404 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020|GO:0016021
Gma15g00474 404 PANTHER WAT1-RELATED PROTEIN 14 372 - -
Gma15g00474 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 340 - -
Gma15g00474 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Gma15g00474 404 PANTHER WAT1-RELATED PROTEIN 14 372 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00474 Gma-Chr15 3989804 3991794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00474 4 366 Nodulin-like Gene Family AT1G68170 42.857 3.14e-95 288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01230 05 33971047 33975106 Gma15g00474 15 3989804 3991794 PCT
Gma08g00727 08 5950234 5959321 Gma15g00474 15 3989804 3991794 PCT