Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00470 ATGAGTAGGGAGATGAAATTTGAGGTGGAAAACAGAAAATGCATAAAGCCCTCCACAGCCACACCCACAGAACTGAAAACATTGAAACTCTCTTTACTAGACCAGCTTTCCCCTAACATCCATGGCAACATGACCCTCTTCTACCCTCACACCAACACTACTACTCTACCTGACTTCTCCACCAAATCCCAACTCCTTCAAACCTCCCTCTCCCAAACCTTGTCCCGCTTCTACCCCATCGCCGGACGCCTCCATGACGCCGCCACCGTCCATTGCAACGACCACGGCGCCCTCTTCATCGAATCCCTTACCAACGCCTCTCTCTCCGACATCCTCACACCCCCAAACTTCGACACCCTCCAATGTCTCCTCCCCTCCGCCGATACCTCCATGCTCCTCCTCGTCCGCTTCACCTCCTTCCGTTGCGGCGCCACCGCCCTCACCATCTCGCTCTCCCACAAGATCGCCGACATAGCTACCGTCATTGCACTCCTCAAAACCTGGACCGCCGCATGCGCCGGAGCCACCCCGCCGGAGCTCCCCGAACTCGCCCTCGGCGCCGCTCTCTTTCCTCCGAGAGAGATTAATCCCGGCATGTCCGCTTCCGTGAACACCGTGTCGTCGGAGAAGTTCACGTCGAGAAGGTTCGTTTTCGACGCGTCCAAGGTTAGAGAGCTTAAGGAAAAAGTAAAGGGCGCACTCGGAGAAGGAGAAGGTTCGGTGGTGTTTGAACCTTCGAGGGTGGAGGTGGTGCTGGCGCTCATATGGAAATGCGCATTGTCGGCTTCTCGCGCGAAAACGGCGGCGTTTAAGCGTTCTGTTTTGTTCCAAGCCGTGAACCTCCGTCCACGGATGGAGCCGGCGGTGCCGGACGTGGCTATGGGGAACTTTGTGTGGGCGTTGGCGGTGACGGCGGAGGAAGAGAGTGACGTGGAGTTGCACGTGCTGGTGAGGAGGATGAGGGAGGGAATGAGGGAGTTTGTGGAGACAAAGGCGGAGAGGTTCAAAGAGGATGGTGCGTTTGGAGTGGTGATGGAAAGTCTGAAGGAGAGGGGTGAAGTAATTAGCAATAGTGTTGTCGTTTATAAGTGCTCGAGTTGGTGTAAGTTTCCACTGCTTAAGGTTGACTTTGGTTGGGGGGAGGCTGTGTGGATGTGCAGTGTGAATAAGATGGTGAGTAATACCATTGCCTTGATGGATACTAGGGATGGTCATGGGGTTGAAGCTTTTGTCACTCTTGATCATCAAGACATGACTTTTTTTGAACAACATCAGGAGCTCCTACACTATGCTTTGCTTAATCCTACTGTTATATAG 1317 0.5383 MSREMKFEVENRKCIKPSTATPTELKTLKLSLLDQLSPNIHGNMTLFYPHTNTTTLPDFSTKSQLLQTSLSQTLSRFYPIAGRLHDAATVHCNDHGALFIESLTNASLSDILTPPNFDTLQCLLPSADTSMLLLVRFTSFRCGATALTISLSHKIADIATVIALLKTWTAACAGATPPELPELALGAALFPPREINPGMSASVNTVSSEKFTSRRFVFDASKVRELKEKVKGALGEGEGSVVFEPSRVEVVLALIWKCALSASRAKTAAFKRSVLFQAVNLRPRMEPAVPDVAMGNFVWALAVTAEEESDVELHVLVRRMREGMREFVETKAERFKEDGAFGVVMESLKERGEVISNSVVVYKCSSWCKFPLLKVDFGWGEAVWMCSVNKMVSNTIALMDTRDGHGVEAFVTLDHQDMTFFEQHQELLHYALLNPTVI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00470 438 Gene3D - 208 431 IPR023213 -
Gma15g00470 438 Gene3D - 4 198 IPR023213 -
Gma15g00470 438 PANTHER F21J9.9 4 438 - -
Gma15g00470 438 PANTHER VINORINE SYNTHASE-RELATED 4 438 - -
Gma15g00470 438 Pfam Transferase family 5 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00470 Gma-Chr15 3942519 3943950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00470 5 385 Monolignol Biosynthesis Gene Families AT5G48930 24.344 1.18e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00470 - - gmx:100808502 832.787