Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00460 ATGCCAAAGTCAAAGAGAAATAGACAAGTTACGCTGTCAAAGACGAAGAAAAAGGGAAGAGACCACAAAGAGACGATAGTGAACGGAATAAAAGATGCGGCAGAAAAGTACGGGTGCGTGTACGTGTTCTCCTTCGAGAATATGAGGAATCAGAAATTAAAGGAGTTCAGGGAACAGTTGAAATCGAATAGCAGGTTCTTTCTGGGTTCTAACAAAGTAATGCAAGTTGCTTTAGGTCGCTCCGCTTCAGATGAGATCAGACCTGGCCTTCACAAGGTTTCAAAGCTATTGCGTGGAGATTCTGGGATGTTTTTCACCAATTTGTCTAAGGAAGAAGTTGAAAGGCTGTTTAAAGAATTTGAGGAATATGACTTTGCAAGAACAGGAAGCATTGCCACTGAAAAGGTGGATCTCAAAGAGGGTCCTTTAGAGCAATTCACTCATGAGATGGAACCCTTTCTCAGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCGGATTTTGTTGTTTGCGACGAAGGAAAGCCTTTGTCACCAGAGGCTGCTCGTATACTGCGTTTAATGGGAATCAAGATGGCTACATTTCGACTTAACTTAATTTGCAGATGGAGTCCCGATGAGTTTGAACTTTACATTGATGGGCCTGATGAATCAGATATTGAATGCTCGTAG 690 0.4232 MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGCVYVFSFENMRNQKLKEFREQLKSNSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMFFTNLSKEEVERLFKEFEEYDFARTGSIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCDEGKPLSPEAARILRLMGIKMATFRLNLICRWSPDEFELYIDGPDESDIECS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00460 229 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
Gma15g00460 229 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 228 - -
Gma15g00460 229 Gene3D - 125 198 IPR043164 -
Gma15g00460 229 Pfam Ribosomal protein L10 19 120 IPR001790 -
Gma15g00460 229 PANTHER RIBOSOME ASSEMBLY FACTOR MRT4 1 228 - -
Gma15g00460 229 MobiDBLite consensus disorder prediction 1 16 - -
Gma15g00460 229 Gene3D - 30 211 IPR043141 -
Gma15g00460 229 MobiDBLite consensus disorder prediction 1 22 - -
Gma15g00460 229 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Gma15g00460 229 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00460 Gma-Chr15 3884794 3887134 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00460 35 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.893 3.78e-10 57.0