Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00451 ATGTCTCTGACAGGCCGTCCTCGTATTGTTGTTAACGGGGTTCGAAGAACGAGAACTTTTCACTATTTCTGGTGCCTATATTGCCAGAGAACCGTGAGGTTACCCTTTACAAACAATGATGGTTCTACGTGCCCCTATTGCTTCCACCAACTGCGTTATGAGCTTGATATCTCAAGGCCAAGGCTTCTCATGAACGTGCCAAATAACTTGGAGCCTTCACAAGCCACTCAACTAATGCATAACTTGGCTCTCATTCTTGATCCACCTCTTAGGAGGCAAAACAACAACCATTTGAACACAACCCCACATTGGGAAACAGAAAATGAAGATGGTTTAAATCCTCAGGCTTGGATTACACTCCGATTTCCAAGGCCAACTCGTCCTCCTAGGCCTATTTCCCCACCACAAAATTTGGTTCCCCAGACCAATGACACTGATCATGACACCCTTTTTGAGAACACAATATTAGATGACTTCATTGATGGGGTGATTCAGAACAATAATAGACCGGGGCCACCTCCAGCAACATCTTCAGCCATTGCAGCATTGCCGATGGTGAAATTGACACAAACCCATTTGGCAAGTGACCCCAATTGCCCAATTTGCAAAGATGAGTTCGAGCTTGATATGGAAGCCAGAGAGTTGCCATGCAAGCATTTCTACCATTCTGACTGCATCATCCCTTGGCTGCGCATGCACAACACTTGCCCTGTGTGCCGCTATGAGCTACAAGGTGTTAGTACTAGTGGTAATGCTAATTACTACCGTTTACAAAATGATGAGAATGACATGAGGTTTGGGTTTGAGGATGCTGCAAGCAGCTTGGTCTGGGTTTGGAACCAATTGACTTCGTTTAGGCCTATCCGTTCTGTTCTAGATTGGACACGGTCCTACTTTAATTTCCAAGAAGATCATGTTCGTGGTCGTAGAGGTAGCTCTTGGTGGCGAGCATTGTTTGTTATATAG 966 0.4524 MSLTGRPRIVVNGVRRTRTFHYFWCLYCQRTVRLPFTNNDGSTCPYCFHQLRYELDISRPRLLMNVPNNLEPSQATQLMHNLALILDPPLRRQNNNHLNTTPHWETENEDGLNPQAWITLRFPRPTRPPRPISPPQNLVPQTNDTDHDTLFENTILDDFIDGVIQNNNRPGPPPATSSAIAALPMVKLTQTHLASDPNCPICKDEFELDMEARELPCKHFYHSDCIIPWLRMHNTCPVCRYELQGVSTSGNANYYRLQNDENDMRFGFEDAASSLVWVWNQLTSFRPIRSVLDWTRSYFNFQEDHVRGRRGSSWWRALFVI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00451 321 CDD RING-H2_RNF126_like 199 240 - -
Gma15g00451 321 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 21 316 - -
Gma15g00451 321 ProSiteProfiles Zinc finger RING-type profile. 199 240 IPR001841 -
Gma15g00451 321 Pfam Ring finger domain 198 240 IPR001841 -
Gma15g00451 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 21 316 - -
Gma15g00451 321 SUPERFAMILY RING/U-box 180 244 - -
Gma15g00451 321 SMART ring_2 199 239 IPR001841 -
Gma15g00451 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 246 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00451 Gma-Chr15 3822839 3824153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00451 1 302 C3H Transcription Factor Family AT1G68180 32.566 8.50e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00451 K11982 - gmx:100793656 527.324