Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00435 ATGGATTTTGGAAAGACTAATGAAGCATCCAATTCAAAGCTGGTTCATGACTTCGACTTGAACATTGCATATGTGGAGGAATTTGATCATGTGAATGCTGAAAACGAGTTTTCATCGCCCATTCTCGTGAATACTACTCAGCAGGCTTGTAAAAATAGCATTGAAAACATGAACATAGAGGATGCAATTGCAAATAACCGGGAGACAACTATTCAAGCAAATTCTGCTGCTAAGGGAGCTACCTCTGAAGATACGAGGCAAGTTGAACCCAAGTATATTGCCTCTGTCTCCTTTACACCAGCAAGAATCTCTCAATACCTTCGTCGTCGCCGCCACCATCGAGGTGCAGAATCTAAGCAGAGTACTGATCCAGATAAACTCTGCACTAATTTTTATTGTAAAACAAGAAAAACTCCCATGTGGCGCAAGGGACCTCTGGGACCAAAGACTTTGTGCAATGCTTGTGGCCTTCAATACCTTAAGATGGTGAAGGGTACAGGCAGTGGCCTCCCTGCGGCAGTTTCAGATGAAGGTGATGCTTCTGTCCCAGCTGAAACCGTGGAAAGGGATTCAAATCTCTAA 582 0.4381 MDFGKTNEASNSKLVHDFDLNIAYVEEFDHVNAENEFSSPILVNTTQQACKNSIENMNIEDAIANNRETTIQANSAAKGATSEDTRQVEPKYIASVSFTPARISQYLRRRRHHRGAESKQSTDPDKLCTNFYCKTRKTPMWRKGPLGPKTLCNACGLQYLKMVKGTGSGLPAAVSDEGDASVPAETVERDSNL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00435 193 Gene3D - 124 167 IPR013088 GO:0006355|GO:0008270
Gma15g00435 193 PANTHER GATA TRANSCRIPTION FACTOR 52 161 - -
Gma15g00435 193 MobiDBLite consensus disorder prediction 172 193 - -
Gma15g00435 193 ProSiteProfiles GATA-type zinc finger domain profile. 133 159 IPR000679 GO:0006355|GO:0043565
Gma15g00435 193 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 119 164 - -
Gma15g00435 193 Pfam GATA zinc finger 133 161 IPR000679 GO:0006355|GO:0043565
Gma15g00435 193 SMART GATA_3 122 175 IPR000679 GO:0006355|GO:0043565
Gma15g00435 193 CDD ZnF_GATA 128 173 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00435 Gma-Chr15 3722203 3723663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00435 126 161 C2C2-Gata Transcription Factor Family AT3G20750 63.889 1.57e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma15g00435 GATA 2.8e-13 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00435 - - gmx:102663335 393.66