Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00434 ATGAGGATGAAGATTGTTGTGATGCTATTGCTACCTTTGATGTTTGCACTGTTTTCATGCACGAGTTCTGCAAATACAACTACATGCCCCATGGACTTGAATTATGTGCTGAGAATCCCATGGAACACTTCTGCTTGCCACAACTTCCAACAAACTTTGGCGGCTAAAAATGGAACCGATGCAAACACTTGTTGCATATCTCTCTTGTCCCTCTTCGGCATAGGACTTGCACAGCATCTCAAGGAGACTTCTCAGTTCCAACTCCCAAACCTTGCCACCTCCCTTTCGTGCATCCAAGACTTCCAATTAAAGCTCTCTTCCCTCTCTCTCCCCAGCAACCTCGCTGACACCTGCTTTGACCCACTTCAGTTTGTGATCTCCCCAAACATCTGTGCTGGAATTCAAACCATCCCTGATTGGACCAAAAAGCTTGGTCAGTCCACACCACTCAACACTGCTTGCAAATCAGATCTGACTGATATCTCTCTCTGTGATGTGTGTCTGCAAGCTGGCTTACAGGCCAAGCAGGTGCTTATTTCTATTGATGGTAATGCTTCACATTCCATTGACTGTTTTTACTTTGCCATTCTCTATGCTGCTGGGGTTGTCAATGAGTTTGGACCTGAAAGCAATGGTGCTGTCAGTTGCATTTTTAGCATATCGGTTTATTCACAAGGGGGCTCTGGGGGAAAGGGTCACCAGGCTCTTGTGTTTGGTTTGACAGGTGCCGGGATTGCTTTGTTGGTCATGTCTTCCTTTTTGGGGATTTATGCATGGTATGACAGGAAGCATAGGAGAAAAAAGCTTGAGACTTTTCAGTTTGATTTTGACCCTGAGGAACAAGGCTCTAGGCCTAGATTGAGACCCAATACCGGGTCAATTTGGTTCAAAATTGAGGAACTTGAGAAGGCTACTGATAACTTTTCATCTAAGAACTTCATTGGCCGAGGTGGGTTTGGGATGGTCTTCAAGGGAACCTTGTCTGATGGAACTGTGGTGGGGGTTAAAAGGATCTTGGAATCTGATTTTCAAGGGGATGCTGAGTTTTGTAATGAGGTGGAGATCATTAGCAACCTCAAGCACCGGAATCTGGTGCCCCTTAGGGGCTGTTGTGTGGCTGAGGAGAATGAGAATTATGATGAAAGGGGAAGCCAAAGttttggtgtggttgctttggagataatgtgtgggaggaaggctcttgacttgtcttcaTCAGGATCACCAAGGGCATTCTTGATCACAGATTGGGCTTGGTCATTGGTGAAGGCTGGGAAGATAGAAGAGGCTCTTGATGCTTTCCTGGTGAAGGATGAGAACTTTCCTAGTTCAAATCCAAAGAGCATAATGGAGAGGTTTTTGCTGGTGGGAATTCTGTGCTCCCATGTGATGGTTGCTTTGAGGCCAACAATTGCTGATGCTTTGAAGATGTTGGAAGGTGACATTGAGGTTCCACAAATCCCTGATCGCCCTATGCCACTTGGCCATCCTTCGTTTTATAATAATAATAATAATGATGGCAGTACTTTTAGCATATCCCCAGCATTAAGCGGCCCCAAATTGCAAACTGGAGACATGCTCAGATCGAAGCTAGCAATGACTGTGGGACAGGTCTTGTTTGCCTCAACAAATTCTATGAATGGCCAACCATGA 1653 0.4386 MRMKIVVMLLLPLMFALFSCTSSANTTTCPMDLNYVLRIPWNTSACHNFQQTLAAKNGTDANTCCISLLSLFGIGLAQHLKETSQFQLPNLATSLSCIQDFQLKLSSLSLPSNLADTCFDPLQFVISPNICAGIQTIPDWTKKLGQSTPLNTACKSDLTDISLCDVCLQAGLQAKQVLISIDGNASHSIDCFYFAILYAAGVVNEFGPESNGAVSCIFSISVYSQGGSGGKGHQALVFGLTGAGIALLVMSSFLGIYAWYDRKHRRKKLETFQFDFDPEEQGSRPRLRPNTGSIWFKIEELEKATDNFSSKNFIGRGGFGMVFKGTLSDGTVVGVKRILESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVAEENENYDERGSQSFGVVALEIMCGRKALDLSSSGSPRAFLITDWAWSLVKAGKIEEALDAFLVKDENFPSSNPKSIMERFLLVGILCSHVMVALRPTIADALKMLEGDIEVPQIPDRPMPLGHPSFYNNNNNDGSTFSISPALSGPKLQTGDMLRSKLAMTVGQVLFASTNSMNGQP 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00434 550 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 14 377 - -
Gma15g00434 550 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 386 527 - -
Gma15g00434 550 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 377 - -
Gma15g00434 550 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 386 527 - -
Gma15g00434 550 Pfam SPARK 24 192 IPR043891 -
Gma15g00434 550 SMART tyrkin_6 308 478 IPR020635 GO:0004713|GO:0006468
Gma15g00434 550 Gene3D Phosphorylase Kinase; domain 1 279 379 - -
Gma15g00434 550 SUPERFAMILY Protein kinase-like (PK-like) 287 377 IPR011009 -
Gma15g00434 550 ProSiteProfiles Protein kinase domain profile. 308 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00434 550 Pfam Protein tyrosine and serine/threonine kinase 311 375 IPR001245 GO:0004672|GO:0006468
Gma15g00434 550 Gene3D Transferase(Phosphotransferase) domain 1 384 486 - -
Gma15g00434 550 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Gma15g00434 550 SUPERFAMILY Protein kinase-like (PK-like) 386 498 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00434 Gma-Chr15 3706575 3708753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00434 386 528 Receptor kinase-like Gene Family AT1G11050 73.427 2.24e-62 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gma15g00434 SPARK 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00434 - - gmx:100806560 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00434 15 3706575 3708753 Gma05g01680 05 38529753 38530694 PCT
Gma15g00434 15 3706575 3708753 Gma08g01168 08 9960048 9963999 PCT