Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00426 ATGGAGAAAATGGAGCAGTTCATTGATAACTTGCCGCCGATGGATCTGATGCGATCGGAGAAGATGACCTTCGTTCAGCTCATCATCCCCGTCGAGTCCGCGCACCGCGCCATCTCCTATTTAGGTGAACTCGGCCTTCTCCAATTCCGCGACTTAAATGCTGATAAAAGCCCCTTTCAGAGAACATTTGTCAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTTCGATTCTTCAAGGATCAAATCAGTAAAGCTGGCCTAATGTCTTCTTCTCGTACTGTATTGCAACCAGATATAGACTTGGAGGATTTAGAGATACAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAACAGTGACAAACTTCAGCAATCATATAATGAACTCCAGGAATTCAAGATTGTATTACAAAAGGCATGTGGTTTTCTTGTTTCCAAACATAGCCTTGCGGTTTCAGATGAAAGAGAACTACAAGAGAATGTATATTCAAATGATGCCTATGTTGAGACAGGATCTTTGCTTGAACAGGAAATGAGGCCTCAGTCATCAAACTCGTCTGGTTTAAGATTTATCAGTGGGATTATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACGAGAGGCAATATGCTTTTCAATCAGGCACCGGCTGATGAACTAATCATGGATCCTGTTTCAGCCGAGATGATTGAAAAAACAGTGTTCGTTGTGTTTTTCTCTGGGGAACAGGCAAGAACCAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGTAAGCAGAGGGAAATAACTAGAGAGGTTTCATCACGTCTTACGGACTTAGAGGCAACTTTGGAAGCTGGGATTAGGCACCGGAACAAGGCTCTAGCTTCTGTTGCAGACCATCTAGCAAAATGGATAAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGTCCTCTATTTGCAAAAACACAGATGCAGGAGGTACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAGTCACCACCTACATATTTTAGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTATTGCTAGGAGCATTGGTTCTTATAGCACGTCAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTCTAATGGCACTGTTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTTTCTGTTCCCTTTCACATATTTGGTGCATCGGCTTACAAATGCCGTGATAGTTCATGCAGGGATGCACATACTATTGGGTTAATCAAATACCAAGATCCATACCCGTTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGATCAGAATTGTCTTTCCTAAACTCTTTGAAGATGAAGATGTCCATTCTGTTTGGTGTGGCACATATGAACTTAGGAATTATATTGAGTTATTTTAATGCTCATTTCTTTCAAAACTCACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCGTTCTCATTGTTATCAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACAGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGACCTCTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCTTTTATACTAAAAAAGCTTCATACTGAGAGGTTTCAAGGTCGTAGTTATGGTATACTGAATACCTCTGAGGTGGATCTTGAGGCTGAACCTGATTCTGCCAGACAACATCATGAAGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATCCACGCCATTGAATTTGTTCTAGGTTCAGTTTCTAATACAGCATCATATCTTCGTCTTTGGGCACTAAGTTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTGATAGGGCTAACCGTTTTTGCCTTTGCAACTGCCTTTATACTACTAATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGAGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTAACAGAGGATGACGATTGA 2469 0.4075 MEKMEQFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLQQSYNELQEFKIVLQKACGFLVSKHSLAVSDERELQENVYSNDAYVETGSLLEQEMRPQSSNSSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADELIMDPVSAEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQREITREVSSRLTDLEATLEAGIRHRNKALASVADHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLFAKTQMQEVLQRATFDSNSQVGIIFHPMDAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARQNKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLIKYQDPYPFGVDPSWRGSRSELSFLNSLKMKMSILFGVAHMNLGIILSYFNAHFFQNSLDIRYQFVPQMIFLNSLFGYLSVLIVIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEVDLEAEPDSARQHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLIGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00426 822 PIRSF ATP6V0A1 12 822 IPR026028 GO:0000220|GO:0046961
Gma15g00426 822 PANTHER VACUOLAR PROTON ATPASES 8 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma15g00426 822 Coils Coil 103 130 - -
Gma15g00426 822 Pfam V-type ATPase 116kDa subunit family 40 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gma15g00426 822 PANTHER VACUOLAR PROTON ATPASE A1 8 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00426 Gma-Chr15 3625419 3636122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00426 4 815 Primary Pumps ATPases(2) AT2G28520 80.736 0.0 1365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00426 K02154 - gmx:100793301 1626.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00426 15 3625419 3636122 Gma15g00426 15 3625419 3636122 ECH
Gma13g02934 13 43902103 43917255 Gma15g00426 15 3625419 3636122 GST
Gma15g00426 15 3625419 3636122 Gma12g00648 12 5442909 5455228 PCT
Gma15g00426 15 3625419 3636122 Gma11g01336 11 11579777 11590550 PCT
Gma12g00648 12 5442909 5455228 Gma15g00426 15 3625419 3636122 PCT
Gma11g01336 11 11579777 11590550 Gma15g00426 15 3625419 3636122 PCT