Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00423 ATGTTGGATCTTAATCTGAATGCCGAGTCGACTCAGAACAACGAGTCGCTGGTGCTGTTGGACAAGTTTCCCGAAGCTTCGTTGGGAACTTCGAATTCCTCCGTCGTGAATGCGGAGGGATCGAGCAACGAGGACTCGTGCTCCACACGCGCCGGCGACGTGTTCGCCTTCAGTTTCGGAATCCTTAAGGTGGAAGGCGCGAACGAAGTCGTCGCCACGGCGACGAAGGAGCTGTTTCCGGTGAGCTCGGAGAATTGGCAGGGGCAGAGTTCGACGTCGTCGTCTCAGGCGAGGAAGAATTTAATGGATCTCCCGCTGGATCATCAAAACGGTGAGGTGAAGGTGGTTCAGGTTCAGCCACAGCCTCAGGTGAAGAAGAGTAGGAGAGGTCCAAGGTCTCGGAGCTCTCAGTACAGAGGAGTCACTTTCTACAGAAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGATTTGACACCGCTCATATTGCTGCTAGGGCCTATGATCGAGCTGCTATTAAGTTCAGGGGACTTGATGCTGATATCAATTTTGATCTCGTTGATTATGAGGAGGATCTAAAACAGATGAAGAATCTTTCAAAGCAGGAGTTCGTGCACATACTTCGCCGCCACAGTACCGGTTTCTCAAGGGGCAGTTCGAAATACCGGGGAGTGACACTTCACAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAGAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAGTGCAATAGAAGAGAGGCTGTCACTAACTTTGAGCCAAGTATATATGAGAGCGAGATGAAACCTGAAGCTATTAATGAAGGTGGCAGTCACGACCTTGACCTCAATCTGGGCATAGCAACCCCAGGACATGGTCCCAAAGAAAATAGGGGCCATCTTCAGTTCCAGTCCATCCCTTACAACATGCATCCCGGAAGAAGTTCAAGGATGGAGACTAATGTTAATTCGGTTATTGGTGATCCTTCTTTGAAAAGGCTGGTTGTAACTGAAGAGCGTCCTTCTGTATATTCCACTTTCTTTCCCAATCTGGAAAGAGCAGAGAGAATGGGCATAGATCCTTCAAAAGGAGTTCCAAACTGGGCGTGGCAGACAAATGGCCAGGTTAATGCCACCCCAGTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCAATTTCAGCTACTTTTCCATCAACTGCCATCTTTCCAACAAAATCCATGAACCCAATTCCCCAGAGCTTCTGTTTCACTTCACACAGCACACCAGGTAGCAATGCACCTCAATTCTATTACGAGGTCAAGTCCTCGCAGGCACCATCCCAGCCTCTATCTTGTAATACAAGTATAAATGGTAGCCCACCACACAAGTTCTGA 1458 0.4877 MLDLNLNAESTQNNESLVLLDKFPEASLGTSNSSVVNAEGSSNEDSCSTRAGDVFAFSFGILKVEGANEVVATATKELFPVSSENWQGQSSTSSSQARKNLMDLPLDHQNGEVKVVQVQPQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHIAARAYDRAAIKFRGLDADINFDLVDYEEDLKQMKNLSKQEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNRREAVTNFEPSIYESEMKPEAINEGGSHDLDLNLGIATPGHGPKENRGHLQFQSIPYNMHPGRSSRMETNVNSVIGDPSLKRLVVTEERPSVYSTFFPNLERAERMGIDPSKGVPNWAWQTNGQVNATPVPPFSTAASSGFSISATFPSTAIFPTKSMNPIPQSFCFTSHSTPGSNAPQFYYEVKSSQAPSQPLSCNTSINGSPPHKF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00423 485 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 456 - -
Gma15g00423 485 MobiDBLite consensus disorder prediction 119 138 - -
Gma15g00423 485 SUPERFAMILY DNA-binding domain 228 288 IPR016177 GO:0003677
Gma15g00423 485 SMART rav1_2 229 292 IPR001471 GO:0003700|GO:0006355
Gma15g00423 485 SMART rav1_2 137 199 IPR001471 GO:0003700|GO:0006355
Gma15g00423 485 CDD AP2 137 193 IPR001471 GO:0003700|GO:0006355
Gma15g00423 485 CDD AP2 228 288 IPR001471 GO:0003700|GO:0006355
Gma15g00423 485 Gene3D AP2/ERF domain 136 195 IPR036955 GO:0003700|GO:0006355
Gma15g00423 485 Gene3D AP2/ERF domain 228 287 IPR036955 GO:0003700|GO:0006355
Gma15g00423 485 ProSiteProfiles AP2/ERF domain profile. 229 286 IPR001471 GO:0003700|GO:0006355
Gma15g00423 485 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TOE2 1 456 - -
Gma15g00423 485 SUPERFAMILY DNA-binding domain 136 193 IPR016177 GO:0003677
Gma15g00423 485 Pfam AP2 domain 228 275 IPR001471 GO:0003700|GO:0006355
Gma15g00423 485 Pfam AP2 domain 137 185 IPR001471 GO:0003700|GO:0006355
Gma15g00423 485 ProSiteProfiles AP2/ERF domain profile. 137 193 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00423 Gma-Chr15 3589693 3594385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00423 113 312 AP2-EREBP Transcription Factor Family AT4G36920 77.340 2.85e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma15g00423 AP2 5.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00423 K09284 - gmx:100796271 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00423 15 3589693 3594385 Gma15g00423 15 3589693 3594385 ECH
Gma13g02939 13 43957771 43962210 Gma15g00423 15 3589693 3594385 ECH
Gma13g02939 13 43957771 43962210 Gma15g00423 15 3589693 3594385 GST
Gma15g00423 15 3589693 3594385 Gma12g00653 12 5505492 5509894 PCT
Gma15g00423 15 3589693 3594385 Gma11g01330 11 11508232 11512862 PCT
Gma12g00653 12 5505492 5509894 Gma15g00423 15 3589693 3594385 PCT
Gma11g01330 11 11508232 11512862 Gma15g00423 15 3589693 3594385 PCT