Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00418 ATGGGTTGCTTTCGTTGCACAGGCAAATCAAGCAAAAAAACCAACAACAATAACATTAATCACGCCGAGAAGCACACCAATCACAACGAGAAACATACTGCTGCTGATAAGGTCAAAGTTGATTTGAATGTGAATGGTAAACAAGAAGATAATAATCCTAAGCCTGATCAGCTATCTCTGGACGTGGAGAATTTGAATTTAAAAGAGGTTTCCAATGAAGGAAAAGTTAACAGTTACCGGGCACAGACATTTACTTTTGCTGAGCTTGCAGCTGCAACAGGGAATTTCAGGTCAGATTGCTTTCTGGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGGCGCATAGAGAAAATAAACCAGGTTGTAGCAATAAAGCAACTAGATCCTCATGGGCTTCAAGGAATTAGGGAATTTGTTGTTGAAGTGTTGACATTGAGTTTGGCAGACCACCCTAATTTGGTCAAGTTAATTGGTTTTTGTGCTGAGGGAGAGCAGAGGCTATTGGTTTACGAATATATGCCATTGGGATCTTTGGAGAATCATTTGCACGATCTTCCGCGTGGTAGAAAACCGATTGACTGGAATACAagaatgaaaatagcagctggtgcagctagaggcttagagtatttgcataataaaatgaaacctcctgtcatatatcgggacctgaaatgctccaatatcctgttaggcgaaggatatcattccaagttatctgattttggcttggcgaaagtaggaccaagtggtgataaaacccatgtttcaaccagagttatgggaacatatggatattgtgccccagattatgcaatgacgggtcaattgacgttcaagtctgatatttatagctttggagttgttcttttggagatcatcacaggcaggaaggcgatcgacaatacaaaacctgctaaagaacaaaatctagttgcatggGCAAAGCCTTTATTCAAAAACCGTAAAAGATTCTGTGAGATGGTTGATCCATTGCTTGAAGGTCAGTATCCAATAAGAGGTTTGTACCAAGCTCTTGCTATTGCTGCCATGTGTGTTCAAGAACAGCCTAATATGCGGCCCGAAACAACTGATGTGGTTACAGCTCTAAATTACCTTGCATCCCAGAAATACGATCCCCAAGTTCATTCAATACAAAGCTGTAGAAAAGGTTTATCTTCtccaagagaaagaagcaatggtcatagacgcactgtcagtaacgattctgatccaagagcaagaagccatgatcatagacgaattgtttgtaatggttctgagacaagagcaagaagcGAAGGTCGTCATAGACGAACTGTTAGTATTGGTAATGGTCATAGTAGTGGTTCTGAGACAGAAAGCTCTCGAAAAGGTGTAGCTTCTCCAAGGGTGAGAAGTGATGGTCATAGACATTTTGTTAGTAATGGTTCTGAGACAGACAGTTCTGGAGATTAG 1458 0.2785 MGCFRCTGKSSKKTNNNNINHAEKHTNHNEKHTAADKVKVDLNVNGKQEDNNPKPDQLSLDVENLNLKEVSNEGKVNSYRAQTFTFAELAAATGNFRSDCFLGEGGFGKVYKGRIEKINQVVAIKQLDPHGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLENHLHDLPRGRKPIDWNTRMKIAAGAARGLEYLHNKMKPPVIYRDLKCSNILLGEGYHSKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEIITGRKAIDNTKPAKEQNLVAWAKPLFKNRKRFCEMVDPLLEGQYPIRGLYQALAIAAMCVQEQPNMRPETTDVVTALNYLASQKYDPQVHSIQSCRKGLSSPRERSNGHRRTVSNDSDPRARSHDHRRIVCNGSETRARSEGRHRRTVSIGNGHSSGSETESSRKGVASPRVRSDGHRHFVSNGSETDSSGD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00418 485 MobiDBLite consensus disorder prediction 395 441 - -
Gma15g00418 485 CDD STKc_IRAK 102 371 - -
Gma15g00418 485 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 405 - -
Gma15g00418 485 Pfam Protein tyrosine and serine/threonine kinase 101 368 IPR001245 GO:0004672|GO:0006468
Gma15g00418 485 PIRSF TyrPK_CSF1-R 97 188 - -
Gma15g00418 485 PIRSF TyrPK_CSF1-R 187 442 - -
Gma15g00418 485 PIRSF TyrPK_CSF1-R 4 82 - -
Gma15g00418 485 PANTHER OS07G0668900 PROTEIN 1 405 - -
Gma15g00418 485 Gene3D Transferase(Phosphotransferase) domain 1 173 391 - -
Gma15g00418 485 MobiDBLite consensus disorder prediction 459 475 - -
Gma15g00418 485 SMART serkin_6 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00418 485 MobiDBLite consensus disorder prediction 384 485 - -
Gma15g00418 485 MobiDBLite consensus disorder prediction 8 22 - -
Gma15g00418 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Gma15g00418 485 MobiDBLite consensus disorder prediction 442 458 - -
Gma15g00418 485 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Gma15g00418 485 SUPERFAMILY Protein kinase-like (PK-like) 82 390 IPR011009 -
Gma15g00418 485 Gene3D Phosphorylase Kinase; domain 1 66 172 - -
Gma15g00418 485 MobiDBLite consensus disorder prediction 1 34 - -
Gma15g00418 485 ProSiteProfiles Protein kinase domain profile. 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00418 Gma-Chr15 3520669 3524329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00418 1 375 Glycoside Hydrolase AT3G07070 56.267 4.29e-146 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma15g00418 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00418 - - gmx:100794680 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00418 15 3520669 3524329 Gma15g00418 15 3520669 3524329 ECH
Gma13g02945 13 44015822 44019160 Gma15g00418 15 3520669 3524329 ECH
Gma13g02945 13 44015822 44019160 Gma15g00418 15 3520669 3524329 GST
Gma15g00418 15 3520669 3524329 Gma12g00657 12 5615481 5619900 PCT
Gma15g00418 15 3520669 3524329 Gma11g01323 11 11397326 11401569 PCT
Gma12g00657 12 5615481 5619900 Gma15g00418 15 3520669 3524329 PCT
Gma11g01323 11 11397326 11401569 Gma15g00418 15 3520669 3524329 PCT