LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g00406	atgaactacatcgcgttcctcgcagattacggcgacgcactcgccgagattgtcgccgattggcctcaaaattcgttgccggagtcttattaccgcagtccggatcgcgagggaaagaatcgctcatcggagatagctgaacggatggcgtggctgatattagtgctcctctgcaagCTCGACGGAAAAGCTGAACTCTACAAGGAGGTTGCACTCTCTTACCTGTTCCTGGCAAATAACATGCAATACGTCGTCGTAAaggtccgcaactcaaacctagggttcatcctcggggaggattggttgacgaagcacgaactgaaggtgaaagagtacgtttccaagtacgagcacgtgggatggaacaaggtttttCTGTCGCTGCCGGAAACTCCGACGGCGGAGCAAGCTAGGGCGATCTTGGAGTGTTTCGACGTCGCATTCCATGATGCGTGCAAGGCACAGTTTTCGTGGGTCGTACCCGACCCGAAACTGCGAGAGGAAATAAAAGCTTCAATAGCTTCGAAATTCGTTCCAAGTCATAGGGAACTCTTTGAGAAGTATCAGGTCGGGTCAGAAACCGTGTTCGGGCTTACACCCGATGATTTGGAGCATAGTCTTTCTGACATTTTATCGGGTAGCGTTTCGTCGTCGCATTCTCCTTCACCTCCACATCGCTTCAAACGCCCGTGA	693	0.2915	MNYIAFLADYGDALAEIVADWPQNSLPESYYRSPDREGKNRSSEIAERMAWLILVLLCKLDGKAELYKEVALSYLFLANNMQYVVVKVRNSNLGFILGEDWLTKHELKVKEYVSKYEHVGWNKVFLSLPETPTAEQARAILECFDVAFHDACKAQFSWVVPDPKLREEIKASIASKFVPSHRELFEKYQVGSETVFGLTPDDLEHSLSDILSGSVSSSHSPSPPHRFKRP	230

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g00406	230	Pfam	Exo70 exocyst complex subunit	1	208	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Gma15g00406	230	SUPERFAMILY	Cullin repeat-like	1	209	IPR016159	-
	Gma15g00406	230	MobiDBLite	consensus disorder prediction	211	230	-	-
	Gma15g00406	230	Gene3D	Exocyst complex component Exo70	1	220	-	-
	Gma15g00406	230	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	1	218	-	-
	Gma15g00406	230	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	1	218	IPR004140	GO:0000145\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g00406	Gma-Chr15	3392697	3393389	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g00406	1	225	EXO70 exocyst subunit family	AT1G07725	47.234	3.92e-65	210

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g00406	K07195		-	gmx:100801773	421.394