Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00397 ATGCCCTTGGACAAGCAAACATTCTTAATGAATGACAGAGAAGAGAAAGAGGAAGAAAACTATCTTCATATTGGTGAAAGAAACATGCACTTCGAGGAAAAAGGAAGTGTTGATGCTACAAGAAAAGTTTACGACTTAACTCTTTTAACGAAGAAGGAATACATGAAAATAATTAAGCTGACAAACAATGGTTCAGCAACACCATCAGAGTTAGTGGCAGCATCACTGTCACATGCCTTTGCACTTTTTGTTGCGGTCTCTGTAGGTGCAAACATTTCTGGTGGTCATGTAAACCCTGCTATCACTTTCGGTGCCTTTGTTGGTGGCCACATTACTCTCTTTAGAAGCATTTTGTACTGGATTGCTCAGTTACTAGGCTCTGTCGTTGCTTGCTTGCTCCTTAAATTTGCCACTGGTGGACTGGAAACATCAGCATTTGCACTGTCTCCTGGGGTGGAAGCAGGGAACGCTCTAGTGTTCGAGATTGTGATGACTTTTGGTTTGGTTTACACGGTGTATGCAACTGCAGTGGACCCAAAGAAGGGTGACCTTGGGATAATTCCTCCAATTGCAATTGGTTTCATCGTTGGTGCGAACATCTTGGCGGGGGGTACATTTGACGGTTCATCTTGTCAGTTGGACTTGGGCTAA 651 0.4347 MPLDKQTFLMNDREEKEEENYLHIGERNMHFEEKGSVDATRKVYDLTLLTKKEYMKIIKLTNNGSATPSELVAASLSHAFALFVAVSVGANISGGHVNPAITFGAFVGGHITLFRSILYWIAQLLGSVVACLLLKFATGGLETSAFALSPGVEAGNALVFEIVMTFGLVYTVYATAVDPKKGDLGIIPPIAIGFIVGANILAGGTFDGSSCQLDLG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00397 216 Pfam Major intrinsic protein 61 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma15g00397 216 Gene3D Glycerol uptake facilitator protein. 52 213 IPR023271 -
Gma15g00397 216 PANTHER AQUAPORIN-8 49 211 IPR034294 -
Gma15g00397 216 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma15g00397 216 PRINTS Major intrinsic protein family signature 160 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma15g00397 216 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma15g00397 216 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma15g00397 216 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 49 211 - -
Gma15g00397 216 SUPERFAMILY Aquaporin-like 60 209 IPR023271 -
Gma15g00397 216 ProSitePatterns MIP family signature. 96 104 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00397 Gma-Chr15 3297240 3299047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00397 59 212 Major Intrinsic Protein MIP AT4G01470 79.870 8.31e-83 245