Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00390 ATGCAAGAGAGAGATAAGAACCAGATCCGAAATGGAAAGGAAAATGGGAGAGAGAGAGAGGAGATCTCCAAGTGGAGATGTCACGGAGAATCGGGACAAAGCTCTTCGTCCACAGAGCAGCTCAAGAAGTTGTTCTCTCCATTCGGACTAGTTACCCAAGCTGATCTAGCTTTGGATCCTATAACCAAAAGGCCCAAAGGGTTCGGCTTTGTCTCCTTCAAATCTGAAATTGAAGCGGAAAAGGCTTTGAGAGCCATGAAtggcaggATTGTTAGTGGAAGGCTGATTTTGGTTGAACTTGCAAATGAGAAATGA 315 0.4349 MQERDKNQIRNGKENGREREEISKWRCHGESGQSSSSTEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKALRAMNGRIVSGRLILVELANEK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00390 104 SUPERFAMILY RNA-binding domain, RBD 37 103 IPR035979 GO:0003676
Gma15g00390 104 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 96 IPR000504 GO:0003723
Gma15g00390 104 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 38 103 - -
Gma15g00390 104 MobiDBLite consensus disorder prediction 1 27 - -
Gma15g00390 104 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 103 IPR000504 GO:0003723
Gma15g00390 104 Gene3D - 1 104 IPR012677 -
Gma15g00390 104 MobiDBLite consensus disorder prediction 1 39 - -
Gma15g00390 104 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN 38 103 - -
Gma15g00390 104 SMART rrm1_1 33 99 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00390 Gma-Chr15 3249546 3253153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00390 41 104 Eukaryotic Initiation Factors Gene Family AT5G06000 40.625 3.53e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00390 K13195 - gmx:100807097 129.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g02976 13 44306292 44308902 Gma15g00390 15 3249546 3253153 GST