Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00379 ATGGAGAGTCACAGTACTGCAGAGGATGAGAGTGGATGGAAAGGATCAAGTGGTGCTCATTCATCAGTTTCACGATGGAGTCCTACAAAGGAGCAAATAGACATGTTGGAGAACTTTTACAAGCAGGGAATAAGGACTCCCAGCACTGAGCAAATACAACAGATTACCTCTAGGCTTAGGGCTTATGGTTACATCGAGGGAAAAAATGTCTTCTACTGGTTTCAAAATCACAAAGCGCGCCAAAGACAGAAGCTCAAGCAGAAGCAACAAAGCATTGCATACTGCAATTGCTTTCTTCATGCCTCCCACCCCATTTGCCAAAATGTTGTCTGCGCTCCATATTGTTTGCAAAAGAGTGGATTCAGCTTTTATCCTCACCAACCAAAGGTGCTTGCAAGTGTAGGTATTAGCTCAAGGATTGAGACTGGGTCCTTTGGCATGCTAAGAATATGTGATGGCATGCAGAGTGAACACCCGGATTATAACTATAGCACCAGTAACCGTGAAGCCTTAACTCTATTTCCTCTTCATCCAACCGGTATTTTGGAAGAAAAAACAACTCATCACTCTGTTGATGTCACCGACAAATCTTTTGTTTCTATTGCTGTTGACGAAAATGGTCATCTTGGAAATCAACCCTGCTTTAATTTTCAGTACTGA 660 0.4258 MESHSTAEDESGWKGSSGAHSSVSRWSPTKEQIDMLENFYKQGIRTPSTEQIQQITSRLRAYGYIEGKNVFYWFQNHKARQRQKLKQKQQSIAYCNCFLHASHPICQNVVCAPYCLQKSGFSFYPHQPKVLASVGISSRIETGSFGMLRICDGMQSEHPDYNYSTSNREALTLFPLHPTGILEEKTTHHSVDVTDKSFVSIAVDENGHLGNQPCFNFQY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00379 219 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 8 218 IPR044555 GO:0003700|GO:0099402
Gma15g00379 219 SMART HOX_1 21 88 IPR001356 GO:0003677
Gma15g00379 219 Pfam Homeodomain 24 83 IPR001356 GO:0003677
Gma15g00379 219 Gene3D - 18 84 - -
Gma15g00379 219 MobiDBLite consensus disorder prediction 10 27 - -
Gma15g00379 219 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 8 218 - -
Gma15g00379 219 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Gma15g00379 219 MobiDBLite consensus disorder prediction 1 27 - -
Gma15g00379 219 CDD homeodomain 25 79 IPR001356 GO:0003677
Gma15g00379 219 SUPERFAMILY Homeodomain-like 23 89 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00379 Gma-Chr15 3198803 3200017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00379 21 119 Wox Gene Family AT5G59340 65.714 2.01e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma15g00379 Homeodomain 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00379 - - gmx:100779632 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00379 15 3198803 3200017 Gma15g00379 15 3198803 3200017 ECH