Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00369 ATGGAGCTTTTGAAGCCTTTGCACCCTCACCATGCACCCATTTTGCGAATTCCCTTTCACGCTGTTCCCTCCTCCTCTTCTTCTTCTTCTCAATCTAAGGTTCCCCTTCCTATGATTTCTAAGGTTCATGTAGCTGTTGGGAAATCGCTCGACAAAGCTGTCCCCTTGCTTCGATGGACTTTAAATCACTTCCGGAACGCGGAAATCGTCATTGTTCATGCTTATCAACCTTCTCTCACCATCCCCACTCTATTGGGGAAATTGCCAGCATCACAGGCTAGTCCTGCAGTGGTGTCTGCTTTTCGAAAAGCGGAAAGAGAACAAACCGTGAAGCTCTTAGACAAGTATTTGAGCATTTGCCGCGCTGCTAGGGTTAGGGCAAGCGTTATTGTAACTGAAGCTGACCAAGTCCAAAAGGGAATTGTTGATTTGGTTATTAAGCATAATATTGAGAAGCTTGTCATTGGAGCAATACCAGAAAATTGCATGAAAGTGAAAAGGAATTCCGGTAAAGCAAATTACACTGCCAAAAATGCTCCTCCATTCTGTGAAGTATGGTTTATCTATAAAGGTAAACACATTTGGACAAGAGAGGCTTCTGAAACACCATGCTATTCATCCTCATGTACTCAACCCGAGATTGCCACCAGAGAAAGCTTGAGATGTAGATCTTTTCAATATGGTAATGAATTATTTGACTCAGAATATCTTCAACCAAATTCAGCAAGAACTACTACTGGTTCTGGAAGTAGAAGTTGGGTTCAGGGGGAAATCATTGAAACTGAAGCCATTTTTTCATCCAGTTGCAGCAGTCATTGTTCCCCCCAAAATTCTTCTCGGGCATATTTAGATACATATTTAGAGGCCATGGAAGAAAGAATTAACAAACAACTTATTGAAACCAAGAGAGAAGCTGAGGCTGTAACAGACGAAGCCTTCGCAGAGCTATTAAAGTGTGAGAAGTTAGAAGTTGAAGCCATGGAGGCTATAAGGAAGGTCAATTTGTTTGAATCTGCCCATGTGCGTGAAGTAAAGCTCAGAAAAGAGGCTGAGGATGCACTGACAGATACAGTACAAGAACAACAAAAGCTCTTGAATGCGAGTGAAGAAATTGCTGGCGAGCTACAAATGACCATGAGAAATATTGCCCTGCTAGATAGTCGTGCTCAGGAAGCACACCGTAGGTGCGATGAAGCTGCAGATGAACTATCACTAATTCAAGAATCCATCTCAACCCTGTGGCAAGAAAGGCAGCAAATCAGGAGACAGAAAATGGAAGCCTTACGTTGGCTTGAGCGTTGGAGAAGTCGTGGGAAAGTTGGAGCAGCTCATTGCAATGGGGTCATTGGGTTTGCTGAAGAATTACCTGAGTTAGCAGAATTTTCATTATCAGATCTTCAAAATGCCACATGTAATTTTTCCAATAGCTTTATAATTGAGCAAGGTGGATACGTTTGTATATACAAGGGAGAAATGTTGGGTAGGACTGTTGCTATAAAAAAGTTCCATCAACATAACATGCAAGGACCATTGGAGTTTCGTCAAGAGGTTCAAGTTCTTGGTAGTCTCCAGCACCCTCATTTAATCACTTTGCTTGGTGTTTGCCCTGAAGCCTGGTCAATTGTATATGAGTACCTCCCCAATGGAACTCtTCAAGACTACCTATTCCGAAAAAGCAACAATTCCCCTTTGACATGGAATACCCGAGCACGAATGATTGCTGAAATCGCTAGTGCACTCTGCTTCCTGCATTCTTTTAGACCTGAATCTATTATCCATGGTGATCTGAAGCCAGAAACTGTACTACTTGATTCTTCACTTGGTTGCAAGATGTGTGGATTTGGGTTCTGCAGGCTGGTCAGTGAGGAGTCTCTCCTCCGTCCTAGTTTCCGCTTGAGCACTGAACCAAAGGGTGCTTTCACATATACAGATCCAGAGTTTCAGAGAACTGGAATACTAACAACCAAGTCTGACATCTACTCCTTCGGGCTCATTATTTTACAACTCCTCACTGGTAGGACTCCAGTGGGATTAGCAGTTTTAGTACGCAATGCAATTTCATGTGGAAAGTTGTCTTCAATTCTTGATTCTTCAGCCGGAGAATGGCCCTCAGCTGTGGCAATGCGATTGGTTGAACTGGGATTGCAATGCTGTCAACAATACCGAAGAGACAGACCAGAGTTAACACCTACACTTGTGAGAGAATTGGAGCAGTTGCATGCTTCAGAAGAGCGACCTGTACCATCTTTTTTCTCATGTCAAATCCTTCTGGAAATAATGCATGATCCTCAAGTTGCGGCAGACGGATTTACCTATGAAGGAGATGCCATACGTGAATGGTTGGAAAATGGGCATGATACTTCTCCCATGACTAATTTGAAATTGAGTCACCTGTTTCTTACTCCCAATCACGCACTTCGACTTGCCATCCAAGACTGGCTTTGCAAACCTTGA 2454 0.4307 MELLKPLHPHHAPILRIPFHAVPSSSSSSSQSKVPLPMISKVHVAVGKSLDKAVPLLRWTLNHFRNAEIVIVHAYQPSLTIPTLLGKLPASQASPAVVSAFRKAEREQTVKLLDKYLSICRAARVRASVIVTEADQVQKGIVDLVIKHNIEKLVIGAIPENCMKVKRNSGKANYTAKNAPPFCEVWFIYKGKHIWTREASETPCYSSSCTQPEIATRESLRCRSFQYGNELFDSEYLQPNSARTTTGSGSRSWVQGEIIETEAIFSSSCSSHCSPQNSSRAYLDTYLEAMEERINKQLIETKREAEAVTDEAFAELLKCEKLEVEAMEAIRKVNLFESAHVREVKLRKEAEDALTDTVQEQQKLLNASEEIAGELQMTMRNIALLDSRAQEAHRRCDEAADELSLIQESISTLWQERQQIRRQKMEALRWLERWRSRGKVGAAHCNGVIGFAEELPELAEFSLSDLQNATCNFSNSFIIEQGGYVCIYKGEMLGRTVAIKKFHQHNMQGPLEFRQEVQVLGSLQHPHLITLLGVCPEAWSIVYEYLPNGTLQDYLFRKSNNSPLTWNTRARMIAEIASALCFLHSFRPESIIHGDLKPETVLLDSSLGCKMCGFGFCRLVSEESLLRPSFRLSTEPKGAFTYTDPEFQRTGILTTKSDIYSFGLIILQLLTGRTPVGLAVLVRNAISCGKLSSILDSSAGEWPSAVAMRLVELGLQCCQQYRRDRPELTPTLVRELEQLHASEERPVPSFFSCQILLEIMHDPQVAADGFTYEGDAIREWLENGHDTSPMTNLKLSHLFLTPNHALRLAIQDWLCKP 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00369 817 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 38 159 - -
Gma15g00369 817 ProSiteProfiles Protein kinase domain profile. 473 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00369 817 SUPERFAMILY RING/U-box 742 816 - -
Gma15g00369 817 SMART Ubox_2 750 813 IPR003613 GO:0004842|GO:0016567
Gma15g00369 817 Coils Coil 291 311 - -
Gma15g00369 817 Gene3D HUPs 27 165 IPR014729 -
Gma15g00369 817 PANTHER OS02G0152300 PROTEIN 32 816 - -
Gma15g00369 817 Gene3D Transferase(Phosphotransferase) domain 1 546 747 - -
Gma15g00369 817 Gene3D Phosphorylase Kinase; domain 1 450 545 - -
Gma15g00369 817 PANTHER OS10G0100500 PROTEIN 32 816 - -
Gma15g00369 817 ProSiteProfiles U-box domain profile. 746 817 IPR003613 GO:0004842|GO:0016567
Gma15g00369 817 Pfam Protein tyrosine and serine/threonine kinase 481 729 IPR001245 GO:0004672|GO:0006468
Gma15g00369 817 SUPERFAMILY Protein kinase-like (PK-like) 457 732 IPR011009 -
Gma15g00369 817 Pfam U-box domain 747 816 IPR003613 GO:0004842|GO:0016567
Gma15g00369 817 Coils Coil 382 402 - -
Gma15g00369 817 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 748 816 IPR013083 -
Gma15g00369 817 CDD RING-Ubox_WDSUB1_like 751 792 - -
Gma15g00369 817 CDD STK_N 41 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00369 Gma-Chr15 3110578 3114891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00369 41 814 U-box Gene Family AT2G45910 36.829 8.14e-167 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma15g00369 PK_Tyr_Ser-Thr 5.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00369 - - gmx:100784632 1609.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00369 15 3110578 3114891 Gma15g00369 15 3110578 3114891 ECH
Gma13g02996 13 44462783 44467239 Gma15g00369 15 3110578 3114891 GST
Gma15g00369 15 3110578 3114891 Gma11g01265 11 10783129 10789594 PCT
Gma11g01265 11 10783129 10789594 Gma15g00369 15 3110578 3114891 PCT