Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00362 ATGGGAGTTTGTTTGAGCGCCCAAATTAAAGCTGAAAGCCCATATAACACTGGGTTCAATTCAAAGTATGTGAGTACGGATGGAAATGATTTCGGCAGCACAAACGATAAGGTTTCAGCAAACTCAATTCCTCAAACTCCTCGGAGTGAGGGTGAGATCTTGCGGTCATCCAATTTGAAGAGCTTTCCCTTGTCAGAACTTAAGACGGCCACTAGAAATTTCCGTCCAGATAGCGTGTTAGGAGAAGGTGGTTTTGGATCAGTTTTTAAGGGGTGGATCGATGAGAATTCATTGACTGCTACCAAACCTGGCACTGGCATTGTTATTGCTGTTAAAAGACTTAATCAAGATGGCATCCAGGGTCACAGGGAGTGGTTGGCTGAAGTCAACTATCTTGGACAGCTTTCTCATCCTCATCTAGTGAGATTGATTGGGTTTTGCCTTGAAGATGAACATCGCCTTCTCGTCTACGAATTTATGCCACGTGGAAGCTTGGAAAACCATTTGTTCAGGAGAGGCTCATATTTTCAACCACTTTCTTGGAGCTTACGTTTGAAGGTAGCTCTTGATGCTGCCAAAGGGCTTGCATTTCTCCACAGTGCAGAAGCAAAAGTGATATATAGAGATTTTAAGACTTCAAATATCTTGCTGGATTCAAAATATaatgcaaaactttctgattttgggctggcaaaggatggaccaacaggtgacaaaagtcatgtctccaccagggtaatgggaacctacggatacgcagcacctgaatatcTAGCCACAGGTCATCTTACTGCTAAGAGCGATGTCTATAGTTTTGGGGTTGTCCTGCTGGAAATGTTGTCTGGCAAGAGGGCTGTTGACAAGAATAGACCATCTGGACAACACAATTTGGTGGAATGGGCTAAACCTTACCTGGCAAACAAGCGTAAGATATTTCGTGTGTTGGACACCCGGCTCGAAGGACAATATTCAACAGATGATGCCTGTAAGCTAGCCACCCTTGCCTTGCGGTGCCTATCAATAGAATCCAAGTTCAGGCCAAACATGGATGAAGTGGTTACAACATTGGAGCAGCTGCAAGTTCCTAATGTAAATGGAGGCCATCAAAATGGGTCTCGTGTTCGTAGAAGAAGTGCTGATGTGAATAGAGGCTATCAAAATCCTTCTGTTAATGGATCTCGAGTTCGTAGAAGAAGTGCCGATGATATTAGCCCTATGGAGACTCCCACAGCTTATCCCCGGCCTTCTGCATCCCCTCTCTATACTTGA 1269 0.4043 MGVCLSAQIKAESPYNTGFNSKYVSTDGNDFGSTNDKVSANSIPQTPRSEGEILRSSNLKSFPLSELKTATRNFRPDSVLGEGGFGSVFKGWIDENSLTATKPGTGIVIAVKRLNQDGIQGHREWLAEVNYLGQLSHPHLVRLIGFCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAAKGLAFLHSAEAKVIYRDFKTSNILLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGKRAVDKNRPSGQHNLVEWAKPYLANKRKIFRVLDTRLEGQYSTDDACKLATLALRCLSIESKFRPNMDEVVTTLEQLQVPNVNGGHQNGSRVRRRSADVNRGYQNPSVNGSRVRRRSADDISPMETPTAYPRPSASPLYT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00362 422 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Gma15g00362 422 PANTHER OS01G0588500 PROTEIN-RELATED 26 380 - -
Gma15g00362 422 MobiDBLite consensus disorder prediction 34 54 - -
Gma15g00362 422 CDD STKc_IRAK 80 359 - -
Gma15g00362 422 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Gma15g00362 422 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00362 422 Pfam Protein tyrosine and serine/threonine kinase 78 356 IPR001245 GO:0004672|GO:0006468
Gma15g00362 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Gma15g00362 422 Gene3D Transferase(Phosphotransferase) domain 1 160 376 - -
Gma15g00362 422 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 26 380 - -
Gma15g00362 422 SUPERFAMILY Protein kinase-like (PK-like) 52 359 IPR011009 -
Gma15g00362 422 MobiDBLite consensus disorder prediction 361 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00362 Gma-Chr15 3071328 3074366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00362 20 356 Glycoside Hydrolase AT3G07070 47.041 1.01e-103 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma15g00362 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00362 - - gmx:100798404 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00362 15 3071328 3074366 Gma15g00362 15 3071328 3074366 ECH
Gma13g03002 13 44510723 44515657 Gma15g00362 15 3071328 3074366 GST
Gma15g00362 15 3071328 3074366 Gma12g00560 12 4680336 4684031 PCT
Gma15g00362 15 3071328 3074366 Gma11g01261 11 10749223 10754145 PCT
Gma12g00560 12 4680336 4684031 Gma15g00362 15 3071328 3074366 PCT
Gma11g01261 11 10749223 10754145 Gma15g00362 15 3071328 3074366 PCT