Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00356 ATGGGTAGCCCCAAGAAGAATGAAAATAAGGGCTTTTTCGCCGCCATGACTTCCGGCATCTCCATGTTCAGCAGCGCCATGCACCGATCTGTCAACGGATTGCTGGGATATGAAGGGGTAGAAGTCATAAATCCGGACGGTGGTAAAGAGGATGCAGAGGAGGAAGCTCAAAGAGGAAGATGGAAACCAGAGGAAAGAGATGGTTACTGGAAGATGATGCACAAATATATTGGCTCAGATGTAACATCAATGGTAACACTACCAGTTATTATTTTTGAACCAATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACCTGTTAGATCAGGCAGATGAATGTGAGGACCCATACATGCGGCTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTCGCATACCAACGAACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTATGAGATGGCTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCACCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACACGGGTAACCCTCAAGAGGGATGGTGTAGTCATAGATTTGGTTCCCCCTCCAACCAAGGTTAATAATTTGATATTTGGCCGAACATGGATTGATTCACCTGGGGAGATGATAATGACAAACTTGACAACTGGAGACAAAGTTGTACTATACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTTTATAATTCTGCTGAGGAGCCTAAAATATTGATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCTTGCGATTCGGAAGGAGAGCCTCTTCCAGGCACTGAATTGAAAGAGGTTTGGCATGTTGCTGATGTTCCAAAGAATGATAAATTCCAGTATACATACTTTGCACATAAAATAAACAGCTTTGACACTGCCCCTAAAAAATTGTTGGCATCAGACTCTCGTTTACGTCCAGATAGATATGCACTTGAGATGGGTGATCTATCCAAATCAGGGGCAGAAAAGAGCAGTTTGGAGGACAAGCAACGCACTGAAAAGAAAATCCGAGAAGCCAAAGAGCATAAATTTACACCGAGATGGTTTGATTTAACTGAAGAAGTGACATCAACTCCTTGGGGTGATTTGGAGATCTATCAATACAATGGTAAATACACCGAGCATCGGGCTGCTATAGATAACTCAGGCAGCATTGATCATGTTGATAATAAAGAAATTGAATTCAATCCATGGCAGTATGGCAATTTGTCCACCGAATGA 1371 0.4252 MGSPKKNENKGFFAAMTSGISMFSSAMHRSVNGLLGYEGVEVINPDGGKEDAEEEAQRGRWKPEERDGYWKMMHKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADECEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVIDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWHVADVPKNDKFQYTYFAHKINSFDTAPKKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEDKQRTEKKIREAKEHKFTPRWFDLTEEVTSTPWGDLEIYQYNGKYTEHRAAIDNSGSIDHVDNKEIEFNPWQYGNLSTE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00356 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Gma15g00356 456 Gene3D - 150 327 - -
Gma15g00356 456 Pfam Oxysterol-binding protein 69 426 IPR000648 GO:0008289
Gma15g00356 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Gma15g00356 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Gma15g00356 456 Gene3D - 358 449 - -
Gma15g00356 456 SUPERFAMILY Oxysterol-binding protein-like 62 438 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00356 Gma-Chr15 3020866 3026210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00356 - - gmx:100779808 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00356 15 3020866 3026210 Gma15g00356 15 3020866 3026210 ECH
Gma15g00356 15 3020866 3026210 Gma12g00670 12 5833323 5835873 PCT
Gma15g00356 15 3020866 3026210 Gma11g01256 11 10701667 10706979 PCT
Gma12g00670 12 5833323 5835873 Gma15g00356 15 3020866 3026210 PCT
Gma11g01256 11 10701667 10706979 Gma15g00356 15 3020866 3026210 PCT