Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00354 ATGGATAGAAGAGCAGTCTCCAGCATCAATACTGATCAAGAGTGTCCTTTGGACGACACTGATTCCTCCTCCGCTCTCTTTAGCTACATAAAGCAAATGCTCATGGAAGACGACACCCAGGAGAGTTACAGTATTTTCCATGATTCCTTGGCCCTCCAACACACTGAGAGATCATTTTATCAAGTTATCACTCACAACTACCCTCCTTCATCTTCCTCCCCCCATCATCAGAGTCCTGAGCAAAGTCTCTCCGTTTCCTCAAGTGATTCTAGTAGTAGCTGCAGCACTAACAGTACTAGCAGCTCCGCCGACTCTCCCTTCAGAAGCCTTCCCCCTCTACTTCCACACTCTACTTTTCCTATTCCTCATAACTTTTTTTTCCACTCAAATTCAACCCAATCTTCAATCAATACTACACTTGGATTCTTCGACAATCCCCTCGCTGAAATTTCTGATTCAGCATTTCTACAACAATTTGAGAGAGGTGTAGACCAAGGTACCCGTTTCCTTCCTCTACACACTACTCCATTCAATATTAATGTTGACCCGAACAACACAGCCTTTTCCTCTTCTTTCACAAAGACAAAAACTCCACCTCCGCAGATGCTAATTAAGACAGAAGCAGAAGGAGAGCCTTTTCTGGCAGGAAGGAAACAAAGGCAGCGGGAAGAGTATGAAGCAGATGGAAGAAGCAGGAAGCAATCGGCACCATACATGGATGACAGTGAGCTATCCGAATTGTTTGATAAAGTACTATTAGGCACTGGCTTAGGAAAAGGGGTACCTCCTGACACAACCCATGAAACAATATTAACGAACATGTTTGGTGGAGATGCTAGCAAAAGTGATGAGGAAGTTGTGGATCTTGGGACACTGTTGATGCTATGTGCACAAGCTGTTGCTTCCGGTAGTAGTCCTTCATTTGCTAAGCAGTTAGTGATGCAGATTAAGCAGCATTCTTCTCCAATAGGGGATGAGACTCAGAGGCTAGCACATTACTTTGGAAATGCCCTTGAAGCACGTTTGGATGGAACGGGTTACCAGGTTTATAGTGTTCTTCTATCCTCCAAAAGAACTTCTGCCAAAGACATGGTAAAAGCTTACCATGTATATCTTTCAATATGCCCATTTGAAAAGCTAGCAGTCATTTTTGCCAACAATTCAATTTGCAACCTAAGTGAGGATGCAAAAACAATTCACATCATAGACTTTGGCATCCGCTATGGCTTCAAATGGCCTGCACTTATCAGCCGTCTATCAAGACGCCCTGGTGGGCCACCCAAACTTCGGATCACGGGGATAGATGTGCCACAACCTGGTTTAAGACCACAAGAGAGGGTGCTCGAAACAGGGCGCAGACTTGCAAATTATTGCAAGCGTTTCAATCTTCCATTTGAGTTCCATGCTATTGCACAGAGATGGGACACCATCAGAGTTGAGGACCTCAAGATAGAAACAGACGAATTTGTGGCTGTGAACTGCTTGTTTCAGTTTGAGCATCTACTTGACGAGACCGTGGTGTTGAATAATCCCAGGGATGCTGTTCTGAAGTTGATTAAGAAAGCTAATCCTGACATATTTGTGCATGGCATTGTCAATGGATCATATGATGTACCGTTCTTTGTTTCACGTTTCCGTGAGGCTCTCTATCATTACTCTGCATTGTTTAACATGCTTGACACCAACGTTGGTCGTGAAGACCCCATAAGGTTGATGTATGAGAAGGAGTTGTTTGGACGGGAGATAATGAACATCATAGCTTGTGAAGGTTGTGAGAGGGTTGAGAGGCCTCAGACATACAAGCAATGGCAGCTTCGGAACATGAGAAATGGGTTTAGGCCGCTTCCTCTGGATCAACGAATCATTGACAAATTAAAGGGTAGGTTGAGAGATGATGCGTACAACAATAATTTCTTGCTTGAGGTGGATGGCAACTGGGTGCTACAAGGTTGGAAGGGACGAATTCTATATGCTTCCTCTTGTTGGGTACCGGCATAG 1998 0.4429 MDRRAVSSINTDQECPLDDTDSSSALFSYIKQMLMEDDTQESYSIFHDSLALQHTERSFYQVITHNYPPSSSSPHHQSPEQSLSVSSSDSSSSCSTNSTSSSADSPFRSLPPLLPHSTFPIPHNFFFHSNSTQSSINTTLGFFDNPLAEISDSAFLQQFERGVDQGTRFLPLHTTPFNINVDPNNTAFSSSFTKTKTPPPQMLIKTEAEGEPFLAGRKQRQREEYEADGRSRKQSAPYMDDSELSELFDKVLLGTGLGKGVPPDTTHETILTNMFGGDASKSDEEVVDLGTLLMLCAQAVASGSSPSFAKQLVMQIKQHSSPIGDETQRLAHYFGNALEARLDGTGYQVYSVLLSSKRTSAKDMVKAYHVYLSICPFEKLAVIFANNSICNLSEDAKTIHIIDFGIRYGFKWPALISRLSRRPGGPPKLRITGIDVPQPGLRPQERVLETGRRLANYCKRFNLPFEFHAIAQRWDTIRVEDLKIETDEFVAVNCLFQFEHLLDETVVLNNPRDAVLKLIKKANPDIFVHGIVNGSYDVPFFVSRFREALYHYSALFNMLDTNVGREDPIRLMYEKELFGREIMNIIACEGCERVERPQTYKQWQLRNMRNGFRPLPLDQRIIDKLKGRLRDDAYNNNFLLEVDGNWVLQGWKGRILYASSCWVPA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00354 665 Pfam GRAS domain family 291 662 IPR005202 -
Gma15g00354 665 MobiDBLite consensus disorder prediction 68 107 - -
Gma15g00354 665 ProSiteProfiles GRAS family profile. 280 663 IPR005202 -
Gma15g00354 665 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 664 IPR005202 -
Gma15g00354 665 MobiDBLite consensus disorder prediction 212 239 - -
Gma15g00354 665 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 14 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00354 Gma-Chr15 3005659 3007820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00354 26 665 GRAS Transcription Factor Family AT1G07530 46.857 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma15g00354 GRAS 9.5e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00354 - - gmx:100780343 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03009 13 44572503 44574101 Gma15g00354 15 3005659 3007820 GST
Gma15g00354 15 3005659 3007820 Gma12g00552 12 4619557 4625233 PCT
Gma15g00354 15 3005659 3007820 Gma11g01254 11 10681268 10684474 PCT
Gma12g00551 12 4613052 4615756 Gma15g00354 15 3005659 3007820 PCT
Gma11g01253 11 10677537 10680643 Gma15g00354 15 3005659 3007820 PCT