Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00353 ATGGATCCAAACTTTATCATAAGCGGCAACGACTTTGATGAATCAAAACAGTGGGATCTCAATGGACACTACACCAACCTTCTCAATGATCCTCTTTCCGATGTTGGCCCACTTGGTTTTTCTCACAATTCAATCTTAAACTCTGAACCCTTTGTTTCATCCTCTGCTTCCGCCGCCGCCGCCTCCTCCTCCACGGCGACGGTGGCGGATCCTTCACCTGAAGAAGACACTGATTTCTCTGAAACCTTCAAGTTCATAAGTCAAATTCTCTTGGAAGAAAACTTCGAACAGAAACCGTGTATGTGTTATGACCCTCTGACCCTGCAACACACTGAGAAATCATTCTATGAGGCTTTGGAATTGGAACCATCACTGCTTCTTTCCCCTAATCAGCACCCGCTTGAGAGCCCTGATGGGAATTCTTCTAATTCCACTACTGATTCTGCCAATTCTCATGATTTGAAGCCTTCTTCACCCAATACACCTGCTTCTGATGCTTTGCATTCCTCTTCCCACGCGCCCTCTTTGGTTGTTCCTCCCCATGCTTTGACTAAAATTAATGATGGAACCGTGGATTTGGATTCTTCTGTAACCAAGCTCTTGGCTGAAAATATTTTCAGTGATGCAGACTCTATGTTGCAGTTTAAAAGAGGGTTGGAGGAGGCTAGTAAGTTTCTTCCTCAGGGGCCTCAGCTTTTCACTGGGTTGGAGAGCCCCACGGTGTCTTCAGAGCCAAAGGGAAGAGGTGTAGCTCTGAAGATGGAGAATTCATTTGGGGTGAAGAATAGAAAGAATCATGCCCGCCAAGATGATGAAGAAGAAAGAAGCAACAAGCAGTCTGCCGTGTCTGCGGTTTGTGTTGAGGAGGAGAGTGAAATATCTGAAATATTTGACAGGGTGTTGCTTAGTGTTGAAAATGTGCCACTGTGTGCTGAAAATAATGGATCTGTGGCAGTGGGAGATAGTAACACAAAGCTAATTGAGAAATCGAGTTTGTCTGATGGGGGGAAGGTTCGATCCAAGAGGCAAGGGAGAAAGAAGGAAACGGTGGATTTGAGGACCCTTTTGGTTTTGTGTGCGCAAGCTGTGTCTTCCAGTGACAACAGGACTGCTAATGAACTGTTGAAGCAGATTAGGCAGCATTCTTCTGCTTTGGGTGATGCCTCACAGAGGTTGGCTCATTATGTGGCCAATGCTCTTGAGGCCCGCTTGGTTGGTGATGGAACTGCCACCCAAATATTTTATATGAGCTACAAGAAGTTCACTACTACTGATTTCCTGAAAGCTTACCAAGTTTTGATATCTGCTTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAGATGATTATGAAAACAGCTGACGGGGCAGAAACGCTTCATATTATTGACTTTGGTATCCTGTATGGTTTCCAGTGGCCAATTCTTATCAAGTTTTTATCAGGCAGACGTGGAGGGCCTCCCAAGCTGCGCATCACAGGAATAGAGTATCCCCAACCTGGCTTTCGTCCGACTGAAAGAATTGAGGAGACTGGTTGTCGTCTAGCTAAGTATTGCAAGCGTTTCAATGTCCCCTTTGAGTACAAGGCCATAGCATCACGAAACTGGGAAACAATTCAAATTGAAGACCTTAAAATTGAGCGCAATGAAGTGCTTGCTGTGAACTGTCTGGGAGGCACTGTTCCATTATTCTTCAATGTATGA 1707 0.4487 MDPNFIISGNDFDESKQWDLNGHYTNLLNDPLSDVGPLGFSHNSILNSEPFVSSSASAAAASSSTATVADPSPEEDTDFSETFKFISQILLEENFEQKPCMCYDPLTLQHTEKSFYEALELEPSLLLSPNQHPLESPDGNSSNSTTDSANSHDLKPSSPNTPASDALHSSSHAPSLVVPPHALTKINDGTVDLDSSVTKLLAENIFSDADSMLQFKRGLEEASKFLPQGPQLFTGLESPTVSSEPKGRGVALKMENSFGVKNRKNHARQDDEEERSNKQSAVSAVCVEEESEISEIFDRVLLSVENVPLCAENNGSVAVGDSNTKLIEKSSLSDGGKVRSKRQGRKKETVDLRTLLVLCAQAVSSSDNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVGDGTATQIFYMSYKKFTTTDFLKAYQVLISACPFKKFAHFFANKMIMKTADGAETLHIIDFGILYGFQWPILIKFLSGRRGGPPKLRITGIEYPQPGFRPTERIEETGCRLAKYCKRFNVPFEYKAIASRNWETIQIEDLKIERNEVLAVNCLGGTVPLFFNV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00353 568 Pfam GRAS domain family 352 558 IPR005202 -
Gma15g00353 568 PANTHER SCARECROW-LIKE PROTEIN 34 43 558 - -
Gma15g00353 568 ProSiteProfiles GRAS family profile. 343 568 IPR005202 -
Gma15g00353 568 MobiDBLite consensus disorder prediction 128 175 - -
Gma15g00353 568 MobiDBLite consensus disorder prediction 129 171 - -
Gma15g00353 568 MobiDBLite consensus disorder prediction 259 279 - -
Gma15g00353 568 MobiDBLite consensus disorder prediction 259 278 - -
Gma15g00353 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 558 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00353 Gma-Chr15 2995010 2996868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00353 82 558 GRAS Transcription Factor Family AT1G07530 46.038 6.50e-125 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma15g00353 GRAS 3.5e-62 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00353 - - aprc:113855970 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03010 13 44582413 44584268 Gma15g00353 15 2995010 2996868 GST
Gma15g00353 15 2995010 2996868 Gma12g00551 12 4613052 4615756 PCT
Gma15g00353 15 2995010 2996868 Gma11g01253 11 10677537 10680643 PCT
Gma12g00550 12 4606638 4608976 Gma15g00353 15 2995010 2996868 PCT
Gma11g01251 11 10663919 10671722 Gma15g00353 15 2995010 2996868 PCT