Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00351 ATGGAGTTTACTAAGTATTCAAATCCCATCCTCAGATACATAAGCGACATCCTCATGGACGAGGAAGACGACTTGGAGTGCAAACCCTGCATGTTGCAGGAATGTTTGAGACTCCAGGCTGCTGAAAAATCCTTCCATGATGCCCTTCTCCATCAAAACCCTTCTCCTTTCCGTGATGAAAACACTTGCATCACGGACTCTGATGAAATTTTTGGTCGCATTCCAAGTTTTGTGAGCAGTGGCAGCTGCACCACAGATAATTCATGTGAGTCTGACTTGCTCAACGGTGTGAGTGAATTTAATTCTTCTTTCCTACAACTACAAACCCCTCTAGTTGATTCCCCAGAAGACGGTTATTTTCATGATGGAACCTGGAATCTATTTCAGTCTCATACAAAGCCACTGATGGTAGAAGAGGGTACTCCAGCTTCAGCACTAAGAGAAAAGAGAAGCCATGGGATGGATGGTCATGCTTCTCATGAAAAGGAAGGAAGAAGAGGTAGCAAGGTTTCAGCCATCTTTTCTGACGACTCAGAGCCACGAGAGATCTTAGATGAGGTGCTGCTTTATCAAACTGGAGGAAGTCAACCACTCTATAGTGCTCCTACTGAGCCATCACAAAGGGTTGATTTAGGAAGGTCCAATGGAAAGGCAACACGTCTACGTTCAAAGAAAGTGTCCACCAACATGGAGACAACTGTGGATTTATGGACCCTTCTGACTCAATGTGCACAGGCAGTGGCAAACTATGACCAAAGAAATGCGAATGAATTACTCAAGCAGATTAGGCAACATTCTTCACCTTTTGGGGATGGGCTTCAGCGTTTGGCTCATTACTTTGCCAATGGCCTTGAGACAAGGTTGGCTGCTGGGACCCCATCATATATGCCCCTAGAAGTGGCAACTGCTGCTGACATGTTGAAAGCTTACAAACTATTTGTTACATCCTCTCCTTTGCAGAGGTTGACAAACTATTTGACAACCAAGACAATCATCAGTCTTGTGAAAAATGAGAGCAGTGTTCATATTATGGACTTTGGCATTTGCTATGGTTTTCAGTGGCCTTGCCTTATCAAGAAGCTCTCAGATAGGCATGGTGGTCCTCCAAGGCTTCGTATAACAGGAATTGATCTTCCTCAGCCGGGATTTCGGCCTGCAGAAAGGGTCGAAGAGACCGGGCGGCGTTTGGCAAACTTCTGCAAGAAGTTCAATGTCCCTTTTGAATACAATTGCCTTGCACAGAAATGGGAAACTATAAGACTTGCAGATCTCAAGATAGACAGGAATGAACTAACTGTTGTTAGCTGTTTCTACCGGCTGAAGAACTTGCCTGATGAAACTGTGGATGTGAAGTGTCCAAGAGATGCTGTGTTGAAGTTGATAAGGAAGATCAATCCAAACGTGTTCATCCATGGGGTGGTCAATGGCGCTTATAGTGCACCCTTTTTCCTTACTAGGTTCAGGGAAGCACTTTATCACTTCTCATCACTGTTTGATGTGTATGAGGCTAATGTGCCTCGTGAAGACCCGCAAAGAGTGATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCCATCAATGTCGTAGCGTGTGAAGGGGCTGAGAGGGTTGAGAGACCGGAGACCTACAAGCAGTGGCAGGTTAGGAACCTCAGAGCTGGGTTCAAGCAACTCCCTTTGGATCCTCAGTTGGTGAATGATGCCAAAGATATTGTGAAGAGGGAATATCACAAAGATTTTGTGGTGGCTGAGAATGACAAGTACGACCCCTTATCATCCAACAGTGTTGGTTTCACTTCGATCAGTTGGAGATTGTCTGAGTCTACGAGGTACATGTCTTGTAATTTCTTGGTCGAGTTCAACATGAACTCTCTTGTGCAAAACTTTAGTGGTCCTATCACGGAATTTTCAAATCAGAACCAAGTAGAGAAGGGGTTTGACTTTGAGTTTGATGATTCATCTTCTTCCCTTTCTTCCGGCGCAAGCTCAGGTGGAGAATCCACAGAGGTAACCAAATACTCCAACCAAATCCTCAGATACATAAGCGACATCCTCATGGACGAGGAAGACGACCTGGAGCGCAAACCCTGCATGTTGCAGGAATGTTTGAGACTCCAGGCTGCTGAAAAATCCTTCCATGATGCTCTTCTCCATCAACCTTCTTCTCGTTTCCGTGATGAAAGTGTTAGCATCACAGACTCTGATGAAAATTATGGTCGCAATGCTAGCTTCGAGAGCAACGGCAGCTGCACCACTGATAATTCATGTGAGTCTGTCTTGGTCAACGGTGTTGGTGAATTTGATTCTTCTTTCTTACAACTACAAACCCCTCTAGTTGATTCCCCAcatgatccatctggggagtcaccaggtgttggcttttttcatgatccatttgtgaagtcacaagctgctggctattttcatgatGGAACCTGGAATCTCTTTCAGTCTCAGAGTCAGACCAAGAAGCCACTGATGGTGGAAGAGGGTTTTTCAGCTTCAGCACCAAGAGAAAAGAGAAGCCATGGGATGGATGATTATGCTTTTCATGAACAAGAAGGAAGAAGAGGCAGCAAGGTTTCAGCCGTCTTTTCGGACGAGTCAGAGTCACCAGAGATCTTAGATGAGGTGCTGCTTTGTCAATCTGGAAGAAGTCAATCCCTCCTTTGTGCTGCTGCAGAACCATCACAAAGTGTTAATTTAGGAGGGTCCAATGGAAAGGGGACACGATCGCGTTCGAAGAAAGTGTCCACCAAAGCCGGCACAGCTGTAGATTTATGGACCCTTCTAACTCAATGTGCGCAGGCCGTGGCAAGCTTTGACCAACGGAATGCAAATGACTTACTCAGCCAGATTAGGCAACACTCTTCAGCTTTTGGGGATGGACTCCAGCGTTTGGCTCATTACTTTGCCAATGGCCTTGAGACAAGGTTGGCTGCTGGGACCCCATCATACATGCCCCTAGAAGGAACAACTTCCGCTGATATGTTGAAAGCTTACAAACTATATGTTACATCCTCTCCTTTGCAGAGGTTGACAAATTATTTGGCAACCCAGACAATTGTTAGTCTTGTGGAAAATGAGGGCAGTGTTCATATTATTGATTTTGGCATTTGCTATGGTTTTCAGTGGCCATGCCTTATCAAGAAGCTCTCAGAAAGGCATGGTGGTCCTCCGAGGCTTCGTATAACAGGAATTGAACTTCCTCAGCCGGGATTTCGGCCTGCAGAAAGGGTCGAGGAGACTGGACGACGTTTGGCAAACTACTGCAAGAAGTTCAATGTCCCTTTTGAATACAATTGTCTTGCACAGAAATGGGAAACTATAAAACTTGCAGATCTCAAGATAGACAGGAATGAAGTAACTGTTGTTAGCTGTTTCTACCGGCTGAAGAACTTGCCTGATGAAACTGTGGAAGTGAAGTCTCCAAGAGATGCTGTGTTGAAGTTGATAAGGATGATCAATCCAAACATGTTCATCCATGGGGTGGTCAATGGCACTTATAGTGCACCCTTTTTCCTGACTCGGTTTAGGGAGGCACTCTACCACTTCTCATCACTGTTTGATATGTTTGAAGCTAATGTGCCACGTGAAGACCCAGAAAGAGTGATGCTTGAAAAAGGGTTGTTTGGAAGGGATGCCATCAATGTCATAGCGTGTGAGGGGGCTGAGAGGGTTGAGAGACCGGAGACCTATAAGCAGTGGCAGGTTAGGAACCAGAGAGCTGGGTTCAAGCAAGTCCGTTTTGATCCTCAGCTGGTGAATCATGAAAAGGAAATGGTGAAGAAGGAATATCACAAAGATTTTGTAGTGGCTGAGGATGGCAAGTGGGTTTTGCTGGGGTGGAAAGGGCGTATTCTGAATGCCATTTCTGCTTGGACTCCTGCTTAA 3891 0.4449 MEFTKYSNPILRYISDILMDEEDDLECKPCMLQECLRLQAAEKSFHDALLHQNPSPFRDENTCITDSDEIFGRIPSFVSSGSCTTDNSCESDLLNGVSEFNSSFLQLQTPLVDSPEDGYFHDGTWNLFQSHTKPLMVEEGTPASALREKRSHGMDGHASHEKEGRRGSKVSAIFSDDSEPREILDEVLLYQTGGSQPLYSAPTEPSQRVDLGRSNGKATRLRSKKVSTNMETTVDLWTLLTQCAQAVANYDQRNANELLKQIRQHSSPFGDGLQRLAHYFANGLETRLAAGTPSYMPLEVATAADMLKAYKLFVTSSPLQRLTNYLTTKTIISLVKNESSVHIMDFGICYGFQWPCLIKKLSDRHGGPPRLRITGIDLPQPGFRPAERVEETGRRLANFCKKFNVPFEYNCLAQKWETIRLADLKIDRNELTVVSCFYRLKNLPDETVDVKCPRDAVLKLIRKINPNVFIHGVVNGAYSAPFFLTRFREALYHFSSLFDVYEANVPREDPQRVMLEKGLFGRDAINVVACEGAERVERPETYKQWQVRNLRAGFKQLPLDPQLVNDAKDIVKREYHKDFVVAENDKYDPLSSNSVGFTSISWRLSESTRYMSCNFLVEFNMNSLVQNFSGPITEFSNQNQVEKGFDFEFDDSSSSLSSGASSGGESTEVTKYSNQILRYISDILMDEEDDLERKPCMLQECLRLQAAEKSFHDALLHQPSSRFRDESVSITDSDENYGRNASFESNGSCTTDNSCESVLVNGVGEFDSSFLQLQTPLVDSPHDPSGESPGVGFFHDPFVKSQAAGYFHDGTWNLFQSQSQTKKPLMVEEGFSASAPREKRSHGMDDYAFHEQEGRRGSKVSAVFSDESESPEILDEVLLCQSGRSQSLLCAAAEPSQSVNLGGSNGKGTRSRSKKVSTKAGTAVDLWTLLTQCAQAVASFDQRNANDLLSQIRQHSSAFGDGLQRLAHYFANGLETRLAAGTPSYMPLEGTTSADMLKAYKLYVTSSPLQRLTNYLATQTIVSLVENEGSVHIIDFGICYGFQWPCLIKKLSERHGGPPRLRITGIELPQPGFRPAERVEETGRRLANYCKKFNVPFEYNCLAQKWETIKLADLKIDRNEVTVVSCFYRLKNLPDETVEVKSPRDAVLKLIRMINPNMFIHGVVNGTYSAPFFLTRFREALYHFSSLFDMFEANVPREDPERVMLEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRAGFKQVRFDPQLVNHEKEMVKKEYHKDFVVAEDGKWVLLGWKGRILNAISAWTPA 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00351 1296 ProSiteProfiles GRAS family profile. 227 603 IPR005202 -
Gma15g00351 1296 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 634 1295 - -
Gma15g00351 1296 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 587 - -
Gma15g00351 1296 MobiDBLite consensus disorder prediction 196 225 - -
Gma15g00351 1296 ProSiteProfiles GRAS family profile. 917 1294 IPR005202 -
Gma15g00351 1296 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 634 1295 IPR005202 -
Gma15g00351 1296 MobiDBLite consensus disorder prediction 147 175 - -
Gma15g00351 1296 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 587 IPR005202 -
Gma15g00351 1296 Pfam GRAS domain family 238 586 IPR005202 -
Gma15g00351 1296 Pfam GRAS domain family 928 1294 IPR005202 -
Gma15g00351 1296 MobiDBLite consensus disorder prediction 196 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00351 Gma-Chr15 2978156 2985519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00351 6 584 GRAS Transcription Factor Family AT2G29060 45.515 3.88e-156 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma15g00351 GRAS 5.9e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00351 - - aip:107612146 1501.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00351 15 2978156 2985519 Gma15g00351 15 2978156 2985519 ECH
Gma13g03013 13 44601141 44603633 Gma15g00351 15 2978156 2985519 ECH
Gma13g03013 13 44601141 44603633 Gma15g00351 15 2978156 2985519 GST
Gma15g00351 15 2978156 2985519 Gma12g00549 12 4593640 4596470 PCT
Gma15g00351 15 2978156 2985519 Gma11g01247 11 10638869 10640911 PCT
Gma12g00549 12 4593640 4596470 Gma15g00351 15 2978156 2985519 PCT
Gma11g01247 11 10638869 10640911 Gma15g00351 15 2978156 2985519 PCT