Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00338 ATGAGAGAACAAAGCTTTGGAGATAAAATGCATGGAATAACTCTCCCTCTCACTGCAACTGCAAATAGCTTCCTTTTGAGATCTCCTCTACCAAGTTGTTTCATACCCACTTGTAAAGTTAGCTACGGATTTCGTTTTAACCATTCTCAGTGGAAGCACCATAAAACAGAAGGATGGAGCAATAGGAATAGAACGATGGTGGTGAGAGCAAGGCGTAGCGAGTCACCGTATGATGTTTTGGGAGTGTCTCCATCAGCATCCGTCGACGAAATCAAAAAGGCCTATCGGAAACTTGCTCTTAAGTATCATCCCGATGTTAATAAAGAGGATAAGGCACAGGAGAAGTTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCTAGTTCCCGCAAAAAATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCGAAGTAGGAATGTACAAACTGAAGAAGAATTTTATGGACTAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAAGAACTGGGAAGCAAACGCTGCTTCACAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTTAATATTACTGATCAAAATGATGATTATAAAACGTCTCAGGGAGAAAATACATCCAACTTTTCTGGGACGGAGACACCAAGCAATAGCAGTCAAGGTGAAGCTAGCAAGGGAAACAGAAGCGTTGACGATAACATTGAGGAAATAGAAGCTACTCTGGCTCAGTTGAAAAAGGAATTAGGTTTATAG 810 0.4012 MREQSFGDKMHGITLPLTATANSFLLRSPLPSCFIPTCKVSYGFRFNHSQWKHHKTEGWSNRNRTMVVRARRSESPYDVLGVSPSASVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRKKYDSGSRGYDFSQGSRSRNVQTEEEFYGLEDFFKDLQEEFKNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDQNDDYKTSQGENTSNFSGTETPSNSSQGEASKGNRSVDDNIEEIEATLAQLKKELGL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00338 269 Coils Coil 246 266 - -
Gma15g00338 269 MobiDBLite consensus disorder prediction 211 253 - -
Gma15g00338 269 PRINTS DnaJ domain signature 77 95 IPR001623 -
Gma15g00338 269 PRINTS DnaJ domain signature 95 110 IPR001623 -
Gma15g00338 269 PRINTS DnaJ domain signature 111 131 IPR001623 -
Gma15g00338 269 SUPERFAMILY Chaperone J-domain 26 135 IPR036869 -
Gma15g00338 269 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 47 267 - -
Gma15g00338 269 Pfam DnaJ domain 76 136 IPR001623 -
Gma15g00338 269 Gene3D DnaJ domain 72 182 IPR036869 -
Gma15g00338 269 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 47 267 - -
Gma15g00338 269 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Gma15g00338 269 SMART dnaj_3 74 131 IPR001623 -
Gma15g00338 269 MobiDBLite consensus disorder prediction 214 246 - -
Gma15g00338 269 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Gma15g00338 269 CDD DnaJ 76 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00338 Gma-Chr15 2907684 2911533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00338 77 137 C2H2 Transcription Factor Family AT1G74250 41.791 7.40e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00338 - - gmx:100812972 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00338 15 2907684 2911533 Gma15g00338 15 2907684 2911533 ECH
Gma13g03022 13 44653522 44657104 Gma15g00338 15 2907684 2911533 GST