Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00310 ATGGATTCTTCTGCTGTCGTGGGTAGCACAATTTCAGAGCCTCATAATGATATGGAATTTGAATCTCATGAAGCGGCATATGCATTTTACAAAGAATATGCTAAGTCTGCAGGGTTTGGCACTGCTAAGTTGAGCAGTCGGCGGTCCAGGGCATCAAAAGAATTTATTGATGCCAAATTTTCATGTATAAGATATGGTAATAAGCAGCAATCTGATGATGCAATTAATCCACGCCCGTCTccaaaaattggttgtaaagcaagcatgcatgtgaagagaaggctagatggtaaatggtatgtctatagctttgtgaaggagcataatcatgagcttttaccagctcaagCTCATTTTTTCCGGAGTCACAGGAGTTCTGATCCACTAAGTAATGATGTTCGAATGCGAAGGCGGAAGAACTCAAATGCAGTTTCTAAATTATTTACTGCAAAtcagaatgttgattgcttagagaactttgtgaaacatcaacatgataaaggacggagtttggttctagaagcaggacatgctcacttgcttcttgaactcttcatgcacatgcaggaagagaatccaaaattcttctatgcagttgatttgaatgaagaacatcgactaagaaatgtgttctgggttgatgctaaaggcttggaagattttacttatttttctgatgttgtttcttttgacacaacatattttacaagcaaatataaaataccattggtattgttcattggagtaaaccatcatattcaaccaacattgcttggttgtgcattgattgctgatgagacaatatatacttttgcctggttactgcaaacatggctcatagcaatgggagaacgaactccacaagtgtttctcactgaccaaaacgaggctattaaagcagctgttgctgcatttcttccaggaacacgtcattgtttttgtttgtggcatattttggaaaagataccaaaacaactggaatttctcggtgcgtggcatgatagctttttggaaaaatttaacaactgtatatacaaatcatgtacagaggagcaatttgataagagatggtgggagttggttgatgactttaaccttagagatgttgagtgggttcaatccttatatgatgaccgtacatgttgggtgccaacttttatgaaagatatttcctttgctggcttgtctactagttcacgctcagaaagtttaaattcattgtttgacaaatatatccaagttgatacttcattgagagattttatagaacagtatagagtgattcttgaagataggcatgaagaggaaGCCAAAGCAAATTTTGATGCCTGGCATGAAACACCTGACCTGAAGTCTCCTTCCCCTTTTGAAAAGCAAATGTTGTTAGTTTACACACATGAAATTTTTAGAAAGTTCCAGGTTGAGGTTTTGGGTGCCGCTGCTTGCCATCTTAAGAAAGAAAATGATTGCATGACTACTACTTATACTGTGAAAGACTTTGAAAACAACCAAACTTATATGGTAGAATGGAACACATCAACCTCAAATATATGTTGTTCAtgtcatttgtttgaatataaaggttatctctgtagacatgctattgttgttctacaaatgtctggtgttttcagcattccaccaaagtatatattgcaaagatggacaaatgctgcTATGAGCAGGCATCCTATTGGTGGAAAAATGGAAGAGGTTCAATCAAAGGTGCGGCGATTCAATGATTTGTGTAGACGGGCCATAATATTAGGTGAAGAAGGTTCTTTGTCACAAGAAAGTTACTATATGGCTTTAGGTGCCATAAGTGAGGCACTAAAGCAATGTGCAAACTTAAACAGTTCTGTTGAGAATGGTATGAGACCTGATGCCTCAAGTACCCATGTTGTTTGTAATGTTGAAAAAGAATATCAATCTATTATTACATCTAATAATAAGATCCCTGATCCAAAACTGAATACGGGAAAGAAAGCTGTGAGGACTGGTATGGCTGGTAGGAGTCTAGGAAGTGTTGAAAACAGTGAAGGAAATAAAGGAAAGGTATCTCAGGTCGAAGAAGGTATGGTGAAAGATGGTTTTCAACAAATGGAGCTGATTGATTCGAGATCACAGAGTGTCATGCCAATGCAGTTTCACGGTGTGGTACCCGCTCTGTTCCATAATATATCGTCACCATTTCATACTGCACCTTCAACTCATTTGCACGAGAACCGTTAG 2232 0.2047 MDSSAVVGSTISEPHNDMEFESHEAAYAFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRLDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLSNDVRMRRRKNSNAVSKLFTANQNVDCLENFVKHQHDKGRSLVLEAGHAHLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDAKGLEDFTYFSDVVSFDTTYFTSKYKIPLVLFIGVNHHIQPTLLGCALIADETIYTFAWLLQTWLIAMGERTPQVFLTDQNEAIKAAVAAFLPGTRHCFCLWHILEKIPKQLEFLGAWHDSFLEKFNNCIYKSCTEEQFDKRWWELVDDFNLRDVEWVQSLYDDRTCWVPTFMKDISFAGLSTSSRSESLNSLFDKYIQVDTSLRDFIEQYRVILEDRHEEEAKANFDAWHETPDLKSPSPFEKQMLLVYTHEIFRKFQVEVLGAAACHLKKENDCMTTTYTVKDFENNQTYMVEWNTSTSNICCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYILQRWTNAAMSRHPIGGKMEEVQSKVRRFNDLCRRAIILGEEGSLSQESYYMALGAISEALKQCANLNSSVENGMRPDASSTHVVCNVEKEYQSIITSNNKIPDPKLNTGKKAVRTGMAGRSLGSVENSEGNKGKVSQVEEGMVKDGFQQMELIDSRSQSVMPMQFHGVVPALFHNISSPFHTAPSTHLHENR 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00310 743 SMART 26again6 517 544 IPR006564 GO:0008270
Gma15g00310 743 ProSiteProfiles Zinc finger SWIM-type profile. 506 542 IPR007527 GO:0008270
Gma15g00310 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 2 707 - -
Gma15g00310 743 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 707 IPR031052 GO:0006355
Gma15g00310 743 Pfam FAR1 DNA-binding domain 29 114 IPR004330 -
Gma15g00310 743 Pfam SWIM zinc finger 513 540 IPR007527 GO:0008270
Gma15g00310 743 Pfam MULE transposase domain 227 320 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00310 Gma-Chr15 2697552 2701753 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma15g00310 MULE 9e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00310 - - gmx:100815102 1509.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00310 15 2697552 2701753 Gma15g00310 15 2697552 2701753 ECH
Gma13g03051 13 44875318 44879568 Gma15g00310 15 2697552 2701753 GST