Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma15g00296 | ATGGATTCCGAGGACGATATGCACGACGCCAACGATGTGGAGTCCCTCGACGACGATTTCTACAGTGGCGAGACCGAGGACCCTCCCATGGATTACTACAGTGACTACGACGACAACGCCGACGATTACTTCGACGACGCCGACGATTCTGACCGGATTGAGTCTCGCCGCCCCGAGCAAAACTTTACCATATTGAGGGAACTGGATATCCGGCAAAGGCAGGAAGACGACATAGCTAGAGTAGCGGCAGTTCTTTCCATACCTCGGGTTTCTGCGAGCATCCTACTTCGTCACTACAACTGGAGTGTTAGTAAGGTGCATGATGCTTGGTTTGCTGATGAAGATCAAGTCCGAAAAACAGTTGGTTTGTTGGAGAAGCCAGTTTTCCAGAATTCTAATACTAGAGAGCTTACTTGTGGCATCTGTTTTGAAATGTATCCTCGTGCACGGGTTGAATCTACTGCTTGTGGCCACCCTTACTGCTATTCATGCTGGGCAGGATATTTTAGCACATCAATTAATGATGGTCCGGGATGTTTGGTGCTGAGATGTCCTGATCCCTCTTGTGGTGCTGCTGTTGGTCAAGATATGATTAATCTTTTAGCATCTGATGAAGATAAACAGAAGTATGACCGTTATCTTCTCAGATCTTATATTGAAGACAACAAGAAGACCAAGTGGTGTCCTGCTCCAGGTTGTGAATATGCAGTTACTTTTGATGCTGGCAGTGGAAATTATGATGTATCTTGCCTCTGTTCATATAGCTTTTGCTGGAACTGCACAGAGGAGGCTCACCGTCCAGTGGACTGTGGCACTGTGTCAAAGTGGATTTTGAAAAATAGTGCAGAATCTGAAAACATGAACTGGATACTTGCTAACTCAAAGCCATGTCCCAAGTGCAAGCGACCAATTGAAAAAAACCAAGGGTGCATGCATATGACATGTACTCCTCCTTGTAAATTTGAGTTTTGCTGGCTATGCCTTGGTGCATGGTCGGACCATGGTGAAAGGACTGGTGGATTTTATGCTTGCAATCGTTATGAAGCAGCTAAACAAGAGGGAGTGTATGATGAAACTGAAAGAAGAAGAGAAATGGCAAAGAATTCGTTGGAGAGATACACACATTATTATGAGCGGTGGGCCAGCAACCAATCTTCGAGGCAAAAAGCTCTTGCAGATCTACACCAAATGCAAACTGTTCATATTGAGAAGCTTAGTGACACACAGTGCCAGCCTGAATCACAGCTTAAGTTCATAACGGAGGCCTGGTTACAGATAGTTGAATGCAGGAGGGTGCTGAAATGGACATATTCATATGGGTACTATTTACCTGAGCATGAACATGCTAAAAAACAGTTCTTTGAGTACTTACAAGGTGAGGCAGAATCTGGTTTGGAGAGACTTCATCAATGTGCTGAAAAGGAACTACAGCTATTCCTGAATGCTGATGGCCCATCTAAAGATTTCAATGACTTTCGAACCAAACTAGCTGGATTGACCAGTGTAACTAGAAACTACTTTGAGAATTTGGTGAGGGCATTAGAGAATGGTTTAGTTGATGTGGATAGTAATGGAGCTGCTTCCAGCAAAGCAACGAGCTCAAAAAATGCTGCAGGGAGCAGCAAGGGGAGAGGAGGAAGAGGAAAAGCGACTATTCGAACTATATCCAGCAGAATGACTGATGATAATCATTGGTCTTGTGAGCACTGTACCTATGCCAATGTTAAGTCTGCCACCACATGTCAAATGTGCAATCAACAGCGTCGATGA | 1770 | 0.4458 | MDSEDDMHDANDVESLDDDFYSGETEDPPMDYYSDYDDNADDYFDDADDSDRIESRRPEQNFTILRELDIRQRQEDDIARVAAVLSIPRVSASILLRHYNWSVSKVHDAWFADEDQVRKTVGLLEKPVFQNSNTRELTCGICFEMYPRARVESTACGHPYCYSCWAGYFSTSINDGPGCLVLRCPDPSCGAAVGQDMINLLASDEDKQKYDRYLLRSYIEDNKKTKWCPAPGCEYAVTFDAGSGNYDVSCLCSYSFCWNCTEEAHRPVDCGTVSKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRREMAKNSLERYTHYYERWASNQSSRQKALADLHQMQTVHIEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYSYGYYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQLFLNADGPSKDFNDFRTKLAGLTSVTRNYFENLVRALENGLVDVDSNGAASSKATSSKNAAGSSKGRGGRGKATIRTISSRMTDDNHWSCEHCTYANVKSATTCQMCNQQRR | 589 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma15g00296 | 589 | MobiDBLite | consensus disorder prediction | 525 | 550 | - | - | |
| Gma15g00296 | 589 | Pfam | IBR domain, a half RING-finger domain | 287 | 335 | IPR002867 | - | |
| Gma15g00296 | 589 | Pfam | IBR domain, a half RING-finger domain | 208 | 270 | IPR002867 | - | |
| Gma15g00296 | 589 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 132 | 219 | IPR013083 | - | |
| Gma15g00296 | 589 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
| Gma15g00296 | 589 | ProSitePatterns | Zinc finger RanBP2-type signature. | 565 | 584 | IPR001876 | - | |
| Gma15g00296 | 589 | SUPERFAMILY | RING/U-box | 134 | 220 | - | - | |
| Gma15g00296 | 589 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
| Gma15g00296 | 589 | PANTHER | RBR-TYPE E3 UBIQUITIN TRANSFERASE | 15 | 537 | - | - | |
| Gma15g00296 | 589 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 561 | 589 | IPR001876 | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma15g00296 | K11968 | - | gmx:100793295 | 1178.31 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma15g00296 | 15 | 2556925 | 2564258 | Gma15g00296 | 15 | 2556925 | 2564258 | ECH | |
| Gma13g03065 | 13 | 45011289 | 45020024 | Gma15g00296 | 15 | 2556925 | 2564258 | GST | |
| Gma15g00296 | 15 | 2556925 | 2564258 | Gma12g00480 | 12 | 3906571 | 3914025 | PCT | |
| Gma15g00296 | 15 | 2556925 | 2564258 | Gma11g01178 | 11 | 9923763 | 9931868 | PCT | |
| Gma12g00480 | 12 | 3906571 | 3914025 | Gma15g00296 | 15 | 2556925 | 2564258 | PCT | |
| Gma11g01178 | 11 | 9923763 | 9931868 | Gma15g00296 | 15 | 2556925 | 2564258 | PCT |
Showing 1 to 6 of 6 entries