Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00287 ATGGATCACCAATCTGGCCAGGGATTTGATTCAGATGATAGTGACCTTGATATGCAAGCAGAAATTAGTGACAAACACGAGAAGGTAGATGAATTTTCAAAAAACTTAGAAATATGTGGAGGTGAAGATGAAATGTTTGTTGAACAACCTGTAGCAGACATTTCAACTGATATAGAAGCTGTAGAACCATTCATAGGCATGGAGTTCAATTCAAGAGAGGAAGCCAGAGAATTCTACATTGCCTATGGTAGGAGGATAGGGTTTACAGTACGAATACACCATAACCGTCGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGTTCTAAAGAAGGCTTTCGTGCAAAAAAGTATTTACACAGGAAAGATAGAGTGCTGCCTCCTCCACCAGCCACTCGGGAAGGTTGTCAGGCCATGATAAGGCTGGCTTTGCGGGATAGAGGGAAGTGGGTTGTCACCAAATTTGTGAAGGAGCATACTCATAAACTAATGAGTCCCAGTAAAGTTCCATGTCGAGGATCTGGGAAGCACTTGGTTAGTGAGGATGAGAAGGATAAAAGAATCCGTGAGCTGTCACTTGAGTTGTACAATGAAAGACAAAAGTGTAAACGACGTTGTGCTGCATATGAAGAGCAGTTAAATGTGATTTTAAATGATTTAGAAAAGCACACAGAACATATCTCTAAAAAGGTTGCTGCTGTAGTAAGAAGCATAAGAGAGATTGAGGAGGAAAAATCAGATTCGGATGGTGGGCAATTAGAGCCATCATAG 780 0.4077 MDHQSGQGFDSDDSDLDMQAEISDKHEKVDEFSKNLEICGGEDEMFVEQPVADISTDIEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYLHRKDRVLPPPPATREGCQAMIRLALRDRGKWVVTKFVKEHTHKLMSPSKVPCRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNVILNDLEKHTEHISKKVAAVVRSIREIEEEKSDSDGGQLEPS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00287 259 MobiDBLite consensus disorder prediction 1 27 - -
Gma15g00287 259 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Gma15g00287 259 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 254 - -
Gma15g00287 259 Coils Coil 202 229 - -
Gma15g00287 259 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00287 Gma-Chr15 2490852 2493025 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma15g00287 FAR1 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00287 - - gmx:100810283 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00287 15 2490852 2493025 Gma15g00287 15 2490852 2493025 ECH
Gma13g03073 13 45069892 45071972 Gma15g00287 15 2490852 2493025 GST