Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00285 ATGGAGATGGAAGCGCTAAATATTCTGCTTCCTCCTGACATTTGCAATATGATTGCTCCTAAGGAGAGTTCAGAGGATGTTCCTATTTGGAAGGGATCTAAGGATGATAGCTTCTCATTAAAGGAAGCTTATCTTTATCTAGCCAAGAAGATCGATGATAATAGGAATATGAACAGTGATCATTTCAAACTCCTCAGGAAGTGGAAGGGCCCTCAGAAAGTTCCCATATCAAAAGCCCAGGCCCGTGTTCACTTCAGGACTTGTTGCGAACAATTGGCGAAACCAGAAAAGTTGACTTTGGTTGTAAGTGTCCAACGAGGCATTGACATGCAAGGTGAGGTACACAGGAGCGCCTCAATTCTCATGGAGTTTGGGATTGATGCCTCCATTAATGGTGAGACAGTAGGAAATGCTACTATAGTGCAGATTAATAGCAGCACAGCTGATGGAAACAAAGTGGGCTGCAGTTCTTTTAATCCTGCTTATAAACAAGGTCATGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGCAGTATCGGTTGCGTCAGTTGATGAGCCCTATGTGGGCCAGGAGTTTGAATCTGAAGCTGCAGCACATGCATTCTATAATGCATATGCTAAACGTGTTGGATTCATCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGAACTGCTATTGGACGGGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCCGACAAACGTGAAAAGATTGTAAGGCAAAGGGCGGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAGTTCTGGTAAATGGGTTATTACAAAGTTTATAATGGAACACACACATCCTTTGACACCTGGAAAAGGTAGAAGAGATTGCATTTATGAGCAATATCCGAATGAACATGATAAAATTCGAGAACTATCCCAGCAGTTGGCTATAGAGAGAAAGCGATCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCAAATTGAAGAGCACAATGATAGTCTTTCAAAGAAAATACAACACATAGTGGACAGTGTGAAGGAGATGGAAACCAAAGAACAGAATCAGAGATAG 1122 0.4198 MEMEALNILLPPDICNMIAPKESSEDVPIWKGSKDDSFSLKEAYLYLAKKIDDNRNMNSDHFKLLRKWKGPQKVPISKAQARVHFRTCCEQLAKPEKLTLVVSVQRGIDMQGEVHRSASILMEFGIDASINGETVGNATIVQINSSTADGNKVGCSSFNPAYKQGHDDNITQDSSGGDTIPSGIPAVSVASVDEPYVGQEFESEAAAHAFYNAYAKRVGFIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVITKFIMEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIERKRSATYKRHLELIFEQIEEHNDSLSKKIQHIVDSVKEMETKEQNQR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00285 373 Pfam FAR1 DNA-binding domain 210 296 IPR004330 -
Gma15g00285 373 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 122 371 - -
Gma15g00285 373 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 122 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00285 Gma-Chr15 2460294 2468475 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma15g00285 FAR1 4e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00285 - - gmx:100806900 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00285 15 2460294 2468475 Gma15g00285 15 2460294 2468475 ECH
Gma13g03077 13 45092669 45093151 Gma15g00285 15 2460294 2468475 GST
Gma15g00285 15 2460294 2468475 Gma12g00463 12 3791019 3792890 PCT
Gma15g00285 15 2460294 2468475 Gma11g01164 11 9798396 9801578 PCT
Gma12g00463 12 3791019 3792890 Gma15g00285 15 2460294 2468475 PCT
Gma11g01164 11 9798396 9801578 Gma15g00285 15 2460294 2468475 PCT