Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00259 ATGAACTTGGGTGCAGCCGAGGAAGAAGAATCGGTTGCACAAGTTCGTGTTCCTGCGGAAATCGATTGGCACAAACTCGATAAATCCAAGTTTTTCTGCCTCGGTGCAGCCCTTTTCTCTGGGGTTTCCGCGACCCTTTACCCTGTTGTTGTGTTGAAAACGCGTCAACAAGTTTTTCCGTCTCAAATTTCTTGCATCAAAACCGCGTTTTCATTGATTAGACTTGAGGGTTTAAGGGCACTGTATAGAGGGTTTGGTACTTCTTTGATGGGTACAATCCCTGCTAGGGCTTTGTACATGGCTGCACTTGAGATCACCAAGAGTAGCGTAGGCACTGCTACCCTTAAGTTTGGGGTAGCTGAACCTACTGCTGCCACTGTTGCCAATGGTGCTGCTGGGTTAAGTGCAGCCATGGCAGCTCAGCTTGTGTGGACCCCAGTTGATGTTGTGAGTCAGAGGTTGATGGTTCAAGGTGTCTCTAATTCTTCTAAGTCATCAAATCAATATATGAATGGGATTGATGCCTTTAGGAAAATTCTTAAGAAAGATGGTGCTAATGGGTTGTATAGGGGTTTTGGGATATCAATTTTGACCTATGCACCTTCCAATGCTGTTTGGTGGGCTTCATATTCTGTGGCACAGAGAATGGTTTGGGGTGGGGTTGGGTGGTGCTTGTGCAAGAAAGGTTGTGGTGGTGAGGGTGAATTGAGGCCAGATTCTAAGACAGTGATGGCTGTTCAGGGAGTGAGTGCAGCAATGGCTGGTGGCATGTCTGCTTTGATTACTATGCCATTGGATACCATCAAGACAAGGCTGCAGGTGTTGGATGGGGATGAGAACGGGCGTCGTGGACCTACAGTTATGCAGACAGTGAGGAAGTTGGTTAGGGAGGGTGGTTGGATGGCTTGTTATAGAGGGTTGGGACCTAGATGGGCTTCAATGTCAATGTCTGCGACAACTATGATCACTACATATGAGTTCCTTAAACGACTTTCCATGAAAAATCAAGAGGTTTTGACTTGA 1023 0.4673 MNLGAAEEEESVAQVRVPAEIDWHKLDKSKFFCLGAALFSGVSATLYPVVVLKTRQQVFPSQISCIKTAFSLIRLEGLRALYRGFGTSLMGTIPARALYMAALEITKSSVGTATLKFGVAEPTAATVANGAAGLSAAMAAQLVWTPVDVVSQRLMVQGVSNSSKSSNQYMNGIDAFRKILKKDGANGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGWCLCKKGCGGEGELRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRKLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSMKNQEVLT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00259 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 242 331 IPR018108 -
Gma15g00259 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 337 - -
Gma15g00259 340 Gene3D Mitochondrial carrier domain 30 338 IPR023395 -
Gma15g00259 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 216 IPR018108 -
Gma15g00259 340 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 337 - -
Gma15g00259 340 Pfam Mitochondrial carrier protein 36 109 IPR018108 -
Gma15g00259 340 Pfam Mitochondrial carrier protein 245 335 IPR018108 -
Gma15g00259 340 Pfam Mitochondrial carrier protein 126 217 IPR018108 -
Gma15g00259 340 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 109 IPR018108 -
Gma15g00259 340 SUPERFAMILY Mitochondrial carrier 25 328 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00259 Gma-Chr15 2244418 2246087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00259 1 337 Chloroplast and Mitochondria Gene Families AT1G72820 73.256 1.79e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00259 K15121 - gmx:100803360 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00259 15 2244418 2246087 Gma15g00259 15 2244418 2246087 ECH