Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00247 ATGGAACCTCGGGTTGCCAACAAGTTCCGTCTTGGCCGCAAGATTGGTAGCGGATCCTTCGGCGAGATCTATCTCGGTACGAATACCCAGACAAATGAAGAGGTTGCAATTAAGCTCGAAAATGTCAAAACCAAGCATCCTCAATTGTTGTACGAATCAAAGTTGTATAAAATACTGCAAGGAGGAACTGGGATCCCAAATGTGAGATGGTTTGGCATTGAAGGAGATTACAATGTCCTTGTGATGGATTTACTGGGACCTAGTCTTGAGGATTTATTCAATTTCTGTACCCGGAAATTGTCTCTCAAAACTGTTCTCATGCTTGCTGATCAGATGATAAATCGAGTTGAGTTTATTCATTCCAAATCATTTTTACATAGGGACATCAAGCCAGACAACTTCCTAATGGGTTTGGGGAGGCGTGCAAATCAAGTTTATGCCATTGACTTTGGTCTTGCTAAGAAGTACAGAGACACCTCTACCCATCAACATATTCCTTACAGAGAGAATAAGAATTTGACTGGAACTGCTAGATATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGACGACTTAGAATCACTTGGATTTGTTCTTATGTATTTTTTGAGAGGAAGTCTCCCATGGCAGGGATTGAAAGCAGGTACTAAGAAGCAGAAGTATGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCTATCGAGTCTCTGTGCCGTGGCTACCCCTCAGAGTTCGCTTCATACTTCCATTACTGTCGGTCACTGCGATTTGATGATAAACCAGATTATGCTTATCTGAAAAGGCTTTTCCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTGCCACACCTGTTCGTGTTATTGTTCCTGCTGCTGGACAAAGTTCTGGGCTGCCACCAGCTGTTGTAAATGCTGATAGACAGACAGGTGGGGTGAACAGTAGGCATACTGGTTGGTCTTCATCTGATCCTGCTCGAAGAAGAAACTCTGGACCTATTGCAAATGATGGAATGTCGTCAAGACAAAAAGCCCCAGTTCCAAGTGATTCAACTGGATCTAAAGATGTTATGTTGTCTAGTTCTAATTTCCGGTCAAGTGGATCCACAAGGCGAGGTGCTGTATCGAGCAGTCGTGATGCAGCTGTTGGCAATGAGACTGAGCCCTCTCATCCTCTCACCATGGATGCTAGTCCAGGAGCACTCCGTAAAATCTCCAATGCTCAAAGAAGTTCACCTATCATGTCATTTGAGCACAACAGAACATCCTCTGGAAGAAACACATCAAACATGAAGAATTACGAGTCAACTCTCCGGGGTATTGAGACCCTAAATTTCAATGACGAGAGGTTACAGTATTAG 1416 0.4266 MEPRVANKFRLGRKIGSGSFGEIYLGTNTQTNEEVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNVRWFGIEGDYNVLVMDLLGPSLEDLFNFCTRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIATPVRVIVPAAGQSSGLPPAVVNADRQTGGVNSRHTGWSSSDPARRRNSGPIANDGMSSRQKAPVPSDSTGSKDVMLSSSNFRSSGSTRRGAVSSSRDAAVGNETEPSHPLTMDASPGALRKISNAQRSSPIMSFEHNRTSSGRNTSNMKNYESTLRGIETLNFNDERLQY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00247 471 MobiDBLite consensus disorder prediction 316 416 - -
Gma15g00247 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gma15g00247 471 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00247 471 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00247 471 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gma15g00247 471 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Gma15g00247 471 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Gma15g00247 471 PANTHER CASEIN KINASE-RELATED 1 456 - -
Gma15g00247 471 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 456 IPR030509 GO:0004672|GO:0005524
Gma15g00247 471 MobiDBLite consensus disorder prediction 326 402 - -
Gma15g00247 471 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00247 471 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00247 Gma-Chr15 2152812 2157742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00247 7 223 EF-hand Containing Proteins AT2G17890 27.111 3.03e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gma15g00247 Pkinase 9.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00247 K02218 - gmx:100795570 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00247 15 2152812 2157742 Gma15g00247 15 2152812 2157742 ECH
Gma13g03118 13 45365709 45371153 Gma15g00247 15 2152812 2157742 GST
Gma15g00247 15 2152812 2157742 Gma07g00070 07 569156 573224 PCT
Gma15g00247 15 2152812 2157742 Gma08g01753 08 15606903 15611114 PCT