Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00242 ATGGGTGCTTCGGGAAGGTGGTTTAAGTCACTTCTTCCTTTTAGAAAGACCTCAACCTCAACAACTGATCAAGATAAGGGTGGTGACAACAAGAGTAAGAAGAAGTGGAAGCTATGGAGGGCTTCTTCAGAAGGGTCCATGAAGAAAGTTGGTGGTGGTGGTGGTGGTGCTGCTGCTGCATCTGATTCTTCCCTTACTTATGCGGTGGCCGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCTTTGAGGGCAGTGGTAAGGCTACAAGCTATTTTTAGAGGCCGGCTAGTCAGGAAGCAAGCAGCTGTTACTCTAAGATGCATGCAGGCTCTTGTTCGAGTTCAGGCGCGAGTGAGGGCAAGGAATGTGAGGAATTCTCCAGAAGGGAAAGCTGTGCAGAAATTACTTGATGAGCATCGCAACCAAGCTGATCCTTTTAATCAAATTGAGCAAGGATGGTGTGATATTCCTGGAACTGTGGATGAAGTTAAAGCAAAGCTACAAATGAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGTCAAGACTGTGTGCTAGTCCAAACCCAAAAGCCACTAAGGCAATGACTCCTCTCAAGAATAACAACCTAAGCAATAAGAGCTTAGGATATAGCTTGTTGGAACGCTGGATGGAAGCCAAGCCATGGGAGAGTCCAATCTCAAGGAAGAGTGAAGGCCTTGTTCCTGCTTTTCAATCAAGAAGGAATGGTATGACAACTAGGGTTTCTGTTAAGCCTATTATAACCAGTCAATCCACTTCATCATCTTCGGCCATAAGCTCTGAGTACATGTGTGATGATAATAGCCCTGTGTCAACATCTTATACATCTGGATCTCCATCTTTGCCATCCACCCACACTGCTTTGGTGGAAGCAACAGAGGAAAGAGATGCTCATCAACCAAGCTACATGAGTCTGACAGAATCAACTAAGGCTAAACTGAGAGCTTGCAGGAGTTCTTCACAGAATTCAAAGAGACTTGTTATGGAGGACAGTGTGTCTCACAGCACAACAACAGGCCTTATGAATGGAGATACTAGAAGCTGTTCTGATTCTGATCCTTCAGTTAACTTGTGGAAGGATTCTTGTGCAACAACTCTAAGGGCAAGTTATCAAAAACGACAAATTAGGATATGA 1248 0.4535 MGASGRWFKSLLPFRKTSTSTTDQDKGGDNKSKKKWKLWRASSEGSMKKVGGGGGGAAAASDSSLTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQKLLDEHRNQADPFNQIEQGWCDIPGTVDEVKAKLQMRQEGAIKRDRAMAYSLSTQSRLCASPNPKATKAMTPLKNNNLSNKSLGYSLLERWMEAKPWESPISRKSEGLVPAFQSRRNGMTTRVSVKPIITSQSTSSSSAISSEYMCDDNSPVSTSYTSGSPSLPSTHTALVEATEERDAHQPSYMSLTESTKAKLRACRSSSQNSKRLVMEDSVSHSTTTGLMNGDTRSCSDSDPSVNLWKDSCATTLRASYQKRQIRI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00242 415 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Gma15g00242 415 MobiDBLite consensus disorder prediction 355 388 - -
Gma15g00242 415 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 411 - -
Gma15g00242 415 SMART iq_5 81 103 IPR000048 GO:0005515
Gma15g00242 415 SMART iq_5 104 125 IPR000048 GO:0005515
Gma15g00242 415 MobiDBLite consensus disorder prediction 26 42 - -
Gma15g00242 415 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Gma15g00242 415 MobiDBLite consensus disorder prediction 17 53 - -
Gma15g00242 415 Gene3D - 80 130 - -
Gma15g00242 415 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
Gma15g00242 415 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Gma15g00242 415 Pfam Protein of unknown function (DUF4005) 309 356 IPR025064 -
Gma15g00242 415 ProSiteProfiles IQ motif profile. 82 110 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00242 Gma-Chr15 2105047 2107502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00242 1 398 IQD Protein Family AT1G72670 47.319 1.62e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00242 - - gmx:100788715 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03123 13 45426174 45428494 Gma15g00242 15 2105047 2107502 GST
Gma15g00242 15 2105047 2107502 Gma07g00076 07 623928 626771 PCT
Gma15g00242 15 2105047 2107502 Gma08g01765 08 15705354 15707706 PCT