Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00239 ATGCGTTCCAGCAACGGTGCATCAAGCAGCAGAGCCTCCAATGCTAACACAGGGCGCCACCCTGTGTACCGTGGAGTGAGGCGTAGGAGTAGTggcaaatgggtttctgaaatccgagaacccaaaaaacctaacaggatttggttagggacatttgccacccctgaaatggctgctattgcctatgacgtggcagcgcttgctcttaagggtaaggatgctgaactcaacttccctaactcggcttcctccctcccggtccccgcatcatccgctgctcgcgacattcagatggctgcggctagcgccgcagccGCTGTCGGAGCTGCGAATGATGCACTTGAAGGAAGCCGAGGAGGGAATGCTTCGGTTTCATTGACGGAAGAGTTTTCAGGGGGAAATTTGAACCACTTTGTGGATGAGGACTTGATCTTTGACATGCCGAATATTCTGGTCAATATGGCTGAAGGAATGCTACTGAGTCCTCCTCGTTTTGATAATTTTGCTGCTACCGACTATGAATACATGGATGAAGATCCTAACCTCTGGGGGTTTCCTAATTACTAG 567 0.2963 MRSSNGASSSRASNANTGRHPVYRGVRRRSSGKWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPASSAARDIQMAAASAAAAVGAANDALEGSRGGNASVSLTEEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPRFDNFAATDYEYMDEDPNLWGFPNY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00239 188 Pfam AP2 domain 21 71 IPR001471 GO:0003700|GO:0006355
Gma15g00239 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 4 186 - -
Gma15g00239 188 MobiDBLite consensus disorder prediction 1 31 - -
Gma15g00239 188 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Gma15g00239 188 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Gma15g00239 188 PRINTS Ethylene responsive element binding protein signature 61 81 IPR001471 GO:0003700|GO:0006355
Gma15g00239 188 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Gma15g00239 188 MobiDBLite consensus disorder prediction 1 17 - -
Gma15g00239 188 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Gma15g00239 188 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Gma15g00239 188 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Gma15g00239 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00239 Gma-Chr15 2084018 2084836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00239 12 186 AP2-EREBP Transcription Factor Family AT2G36450 62.983 5.88e-59 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma15g00239 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00239 - - gmx:100799620 328.561