Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00235 atgaaagaCTTAATTTTAACTTCAACTGCTATCAACGAGTTGCCCTCATCGATTGGGAGTCTAAGAAAACTAGAAACACTGACCCTTGATCACTGCAAAAGCCTAAGCAATCTTCCAAACAAGGTTGCCAACCTAAGATCACTTCGACGTCTTCATATTTATGGCTGCACACAACTTGATGCATCAAATCTTCATATCCTAGTTAATGGTTTAAAGTCTTTGGAAACATTGAAGTTGGAAGAATGCCGTAACTTGTTTGAAATTCCAGACAACATCAACCTCCTATCATCATTGCGTGAGTTGTTACTAAAAGGAACAGATATTGAGAGTGTTTCTGCAAGCATCAAGCATCTTTCAAAGCTGGAAAAGCTTGACTTGAGTGATTGCAGAAGGCTTTATTCTCTGCCAGAGCTTCCACAGTCCATAAAAGAGCTATATGCCATTAACTGTTCATCCTTGGAGACTGTAATGTTCACTTTGAGTGCTGTTGAAATGCTACATGCATACAAGTTACACACGACATTCCAAAATTGTGTAAAATTGGATCAACATTCACTCAGTGCTATTGGAGTAAATGCTTATGTGAACATAAAGAAAGTGGCATATGATCAATTTTCAACAATTGGAACCAACTCAATCAAGTTTCTTGGTGGTCCAGTTGATTTTATCTACCCTGGAAGTGAGGTTCCAGAGTGGTTCGTGTATAGGACTACACAGGCTTCAGTAACTGTTGATCTCTCTTCTTCTGTTCCATGTTCCAAGATCATGGGTTTCATCTTTTGTGTTATTGTTGATCAGTTCACTTCAAACGACAAGAACTATATTGGATGTGACTGTTACATGGAAACCGGTGTTGGTGAAAGGGTCACACGTGGGCACATGGATAATTGGTCTAGCATACATGCCTGTGAATTTTTCTCCGACCATGTGTGTCTGTGGTATGATGAAAAATGCTGTCTGAAAAACCAAGAATGTGAAAGTGAAAGCATGGAAGAACTTATGGCAAGTTATAATCCAAAGATTTCATTTGAATTCTTTGCTAAAACTGGAAGTATTTGGGAAAAGCGGAGCGATATTATAATTAAAGGGTGCGGAGTGTGTCCAATATATGACACAGAATGTGACAATTTCTTTAAACAGATGGAATTGGAGTTGGAAATCACATTGCAATCCATGGCAACTAAAATGTCAAGTAAGGAAGCAACACTATCTCCAAAACAGGAATCTAAGAAACTGATCTTTCCACCCCATCAAATTGGAACTTGGAAGAATGCAACACAAGGGTTGAAAGATATACTGTTCCTGTGA 1308 0.3838 MKDLILTSTAINELPSSIGSLRKLETLTLDHCKSLSNLPNKVANLRSLRRLHIYGCTQLDASNLHILVNGLKSLETLKLEECRNLFEIPDNINLLSSLRELLLKGTDIESVSASIKHLSKLEKLDLSDCRRLYSLPELPQSIKELYAINCSSLETVMFTLSAVEMLHAYKLHTTFQNCVKLDQHSLSAIGVNAYVNIKKVAYDQFSTIGTNSIKFLGGPVDFIYPGSEVPEWFVYRTTQASVTVDLSSSVPCSKIMGFIFCVIVDQFTSNDKNYIGCDCYMETGVGERVTRGHMDNWSSIHACEFFSDHVCLWYDEKCCLKNQECESESMEELMASYNPKISFEFFAKTGSIWEKRSDIIIKGCGVCPIYDTECDNFFKQMELELEITLQSMATKMSSKEATLSPKQESKKLIFPPHQIGTWKNATQGLKDILFL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00235 435 Pfam C-JID domain 224 373 IPR045344 -
Gma15g00235 435 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 392 IPR044974 GO:0006952
Gma15g00235 435 SUPERFAMILY RNI-like 3 179 - -
Gma15g00235 435 Gene3D Ribonuclease Inhibitor 1 188 IPR032675 -
Gma15g00235 435 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00235 Gma-Chr15 2060872 2062179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00235 8 154 WRKY Transcription Factor Family AT4G12020 35.333 2.25e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00235 - - gmx:100799103 870.152