Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00228 ATGGAATTGCAGCTTATTTTCCTGCTAATTAAGCTACATTTTGTTATATGTATTCCCCAGCTTCATGAATATGCTGCCACTTATCTGCACCATTCGAGAATCAGAAGCCCTTCAAGTATTGCATTCCCGCCATCAGAATCACTTTCTGGACTTCCTCATAGTATTGCACTTCCACCTTCCAAGGCATCTTCTAGAAATGCCGGAAGTATTGCACTTTCACCTTCCAAATCATTCCCCAAAATGAAATGGACGCACAGTTCTATGGACTCTCCAATATCACACCATAAGCATCACCATTCCAGAAGAAAGTCCAACAACCAAGTTCCTGGCCCAACCTATCCAATCCACCCTCATACTCATCAAGGTTCTCCAGTCTTCAAATATCAACATTCATTCTCTTCACCTATGAGCCTGCGTTTAAATGCACCCACATCAGCACCAGCACCAGCACCTGCATCATCACCAACAGTTCTATCACACCACTTGAATGTACCCTCTCCTTCACCTAGAATTTCACCTCCAGGTTCATCATTGAAGAAGACAGAGACTCCACCACCAGCATATACTTTGGTTCTACCATCTCCACCACCTAACAAAGATTGTATATCGGTGACTTGCTCTGAGCCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTGTGGCCACTTCAAGTTAAACTTCGCATCAACATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGCTTGCCAATGAAATTGCTGCTAGTGTTTTGCTGAACCATAATCAAGTACGCGTTGTGGGAGCTGATGCAACTAGCCAGCAGCTCGAGAAAACCACTGTTCTCATAAATTTGGTACCTCAAGGAGTGAAGTTTGATGACACAACTGCATTTTTAATATATAAGAAATTCTGGCAGAGAGAGGTTCTCAATGATGCTTCTGCCTTTGGTGACTATGAAGTGCTCTATGTTCATTATCCAGGCCTTCCACCATCTCCACCTTCAAATGTTCACGGTATAGATGTTGAACCATACCCTGGTCGCAGGAATGGTGGAACAATAGTGAAACCTTTAGGAGTAGATGTCTCAGGGAAGAAAAAAGAAGGGAGTGGTGGAAGAATGGTTATTATGATCGTGCTGTCATCTTTTGCTGCCTTTGTTCTATTCATTGGAGTTGCCTGGCTTTGTCTCTTGAAATGTGGTTCCTGCACTCTTGAACCTGAACAAATTCCAGATGTCAAAATTCCATTCTCTTCAAAGCGATCAGGGACTGCCAGTGCAAGGGCATTGAATTATGGGAGCATGCCGGGTTCTAGATCAATGTCCTTCAATTCTGGAACAATAATATATACAGGATCAGCTAAAATATTTACTTTGaatgaaatagagaaagcaacaaataacttcgattcttcaagaatattaggagaaggtggcttcggtcttgtttacaaaggtgacctagataacggcagggatgtggcagtgaagattctcaaaagagaggaccagcatggagaccgtgaattctttgtagaagctgagacgcttagctgcttgcaccatagaaatttagttaaaTTGATAGGTTTATGCACAGAGAAACAAACTCGCTGCTTAGTCTACGAGCTTGTCCCTAATGGCAGCGTTGAATCCCACTTACATGGTGCTGACAAGGAAACCGAGCCACTTGATTGGGATGCACGGATGAAGATTGCACTTGGTGCAGCTAGGGGATTGGCTTATCTGCATGAAGATTGTAATCCATGTGTCATACATAGGGACTTCAAATCCAGCAACATCTTGTTGGAATATGATTTTACACCCAAAGTTTCAGATTTTGGATTGGCTAGAACAACACTGAACGAGGGAAGCAACCACATCTCAACACATGTCATTGGAACATTTGGCTACGTAGCTCCTGAATATGCAATGACCGGCCATCTTCTtgtgaaaagtgatgtttacagctatggagttgtactccttgagctcctaactggaagaaagcctgtggATTTGTCACAGCCACCAGGTCAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATAGACCCAATTATAAAACCCGTTTTTTCTGTCGATACCATGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCACTCAACGTCCTTTCATGGGTGAAGTTGTTCAGGCATTGAAGCTGACCAAGGTGTCGTGGACTTCTCAATTCAACTTCACAACACTGGACATCCAATCCCATAATGCCCGAGTATTCAATAATCCAATTCTTCTAGATCCAAAGCTGACCGTTTGGAGTCAAAGACCTGATAATGGTTATCCAAGTACGATGCTAATGTCATGTCCAAGTGATGAGGAACAATAA 2400 0.3808 MELQLIFLLIKLHFVICIPQLHEYAATYLHHSRIRSPSSIAFPPSESLSGLPHSIALPPSKASSRNAGSIALSPSKSFPKMKWTHSSMDSPISHHKHHHSRRKSNNQVPGPTYPIHPHTHQGSPVFKYQHSFSSPMSLRLNAPTSAPAPAPASSPTVLSHHLNVPSPSPRISPPGSSLKKTETPPPAYTLVLPSPPPNKDCISVTCSEPLTYTPPGSPCGCVWPLQVKLRINIAIYKFFPLVSKLANEIAASVLLNHNQVRVVGADATSQQLEKTTVLINLVPQGVKFDDTTAFLIYKKFWQREVLNDASAFGDYEVLYVHYPGLPPSPPSNVHGIDVEPYPGRRNGGTIVKPLGVDVSGKKKEGSGGRMVIMIVLSSFAAFVLFIGVAWLCLLKCGSCTLEPEQIPDVKIPFSSKRSGTASARALNYGSMPGSRSMSFNSGTIIYTGSAKIFTLNEIEKATNNFDSSRILGEGGFGLVYKGDLDNGRDVAVKILKREDQHGDREFFVEAETLSCLHHRNLVKLIGLCTEKQTRCLVYELVPNGSVESHLHGADKETEPLDWDARMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTTLNEGSNHISTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIIDPIIKPVFSVDTMVKVAAIASMCVQPEVTQRPFMGEVVQALKLTKVSWTSQFNFTTLDIQSHNARVFNNPILLDPKLTVWSQRPDNGYPSTMLMSCPSDEEQ 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00228 799 PANTHER OS01G0750732 PROTEIN 7 742 - -
Gma15g00228 799 ProSitePatterns Protein kinases ATP-binding region signature. 471 493 IPR017441 GO:0005524
Gma15g00228 799 MobiDBLite consensus disorder prediction 83 183 - -
Gma15g00228 799 Pfam Protein tyrosine and serine/threonine kinase 468 738 IPR001245 GO:0004672|GO:0006468
Gma15g00228 799 SUPERFAMILY Protein kinase-like (PK-like) 444 743 IPR011009 -
Gma15g00228 799 CDD STKc_IRAK 471 739 - -
Gma15g00228 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Gma15g00228 799 PANTHER OS01G0750732 PROTEIN 7 742 - -
Gma15g00228 799 Gene3D Transferase(Phosphotransferase) domain 1 541 759 - -
Gma15g00228 799 Gene3D Phosphorylase Kinase; domain 1 437 540 - -
Gma15g00228 799 ProSiteProfiles Protein kinase domain profile. 465 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00228 799 MobiDBLite consensus disorder prediction 124 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00228 Gma-Chr15 2003861 2010424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00228 198 740 Receptor kinase-like Gene Family AT5G56890 63.206 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma15g00228 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00228 - - gmx:100798578 1458.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00228 15 2003861 2010424 Gma15g00228 15 2003861 2010424 ECH
Gma13g03138 13 45524777 45530172 Gma15g00228 15 2003861 2010424 GST
Gma15g00228 15 2003861 2010424 Gma07g00091 07 750033 755290 PCT
Gma15g00228 15 2003861 2010424 Gma08g01781 08 15850734 15856379 PCT
Gma07g00091 07 750033 755290 Gma15g00228 15 2003861 2010424 PCT
Gma08g01781 08 15850734 15856379 Gma15g00228 15 2003861 2010424 PCT