Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00218 ATGGAGGAAAAGCCTAAGCTCCTCATCCATGGAACAATTGAAGCTACCATCTTCAATGCCACACCTTACTCACCTTCGTTTCCCTTCAATTGTGTATGCACAAATGGAAAGCCTGCTTATGTGACCATCAACATCGACAACAATAGGGTGGCGAAAACGACCCAAGAACATGAACGTGTGTGGAACCAAACCTTTCAGATTCAGTGTGCTCATCCAGAAGACTCAACTACCACAATTACCCTGAAAACATCATGCTCCGTTTTGGGAAAATTCCACGTGCAGGCCAAGCGGTTGAAGGAAGAGAGTTTGATCAATGGTTTCTTCCCTCTCCTTATGGAAAATGGAAAACCAAATCCACAACTAAAATTAAGATTCATGTTATGGTTCAAGCCAGCAGATATGGAACCAAGTTGGACAAAGATACTAAGCAATGGGGAATTTCAAGGGCTGAGGGATGCTACATTCCCACAAAGGTCCAATTGCCAGGTTAAACTCTATCATGATGCTCACCATTCCTCTACTTTCCACCCTCCTTTTGATCTATGTGGAGCACCAAGAAAGCTGTGGGAAGATGTCTATAAAGCCATTGAGGGTGCAAACTATTTGATTTATATTGCAGGCTGGTCTTTCAATCCCAAGATGGTTCTGGTTAGAGATCCACAAACAGAAATCCCACATGCTAGGGAGATAAAGCTGGGTGAACTATTGAAGAAGAAGGCAGAGGAAGGAGTAGCTGTGAGGGTTATGATTTGGGATGATGAAACATCTTTGCCTTTTATTAAGAACAAAGGTGTGATGAAGACTCATGATGAGGACGCTTTTGCCTACTTCAAACACACAAAAGTAATATGCAGAAAGTGTCCCAGGTTACACCACGAGTTTCCCACACTCTTTGCTCACCATCAGAAGACCATAACTGTGGACACCAGAGCACCCAACTCTGTTCGTGCCAGAGAAATTATGAGCTTTTTGGGTGGTGTAGATTTGTGCGATGGCCGGTATGACACAGAGAAACACTCACTGTTTCAGACACTCACCGAGGAATCACATTACCATGACTTCTACCAGACAAACATAGCAGGAGCTAGCCTCAACAAAGGAGGGCCAAGAGAGCCTTGGCATGATGCTCATGCTAGTGTAACTGGTGATGCTGCTTGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAATGTGATGCTTCTCTTCTAGTCCCTGCCAACACTCTAGAAAATCTCATTCCCACATGCTCAAGCCCTCCCAAAGAGAGGAATTGGAAAGTTCAAGTATACAGGTCAATTGACCATGTGTCTGCTAGCCAGTTGTTTAGAAAGCTAACTGTGGAGAGAAGCATCCATGAAGCCTATGTTGAAGCAATTAGGCGTGCCGATAGGTTTGTGTACATCGAAAACCAATATTTTATTGGGGGGTGCCATTTGTGGCAGAAAGATAGGCATAGTGGATGCAGGAATCTGATTCCGGTCGAGATTGCACTCAAGGTGGTCAGTAAGATTAAAGCAAGAGAGAGGTTTGCAGTGTACATAGTCATCCCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCACTGGACCAGAGAAACAATGATAATGATGTATACGTTGATTGGAGAAGCAATAATAGAAAGTGGTGAGCCAGGACATCCAAGAGATTACTTGAATTTCTTCTGCCTTGCAAATAGGGAAAAGAAGGGAAAAGAGGAGTATCTTTCACCACATTCTCCCCATCCTGAAACACAATACTGGAATGCACAAAAAAATAGGAGGTTCCCGGTTTATGTTCACTCCAAGATCATGATAGTGGACGATATATACATATTAATAGGATCAGCCAATGTGAACCAAAGATCCATGGATGGGCAAAGGGACACTGAGATTGCCATTGGGGCCTACCAATCTCAAGATGGAGCTGATCACCACATTATAAGCCGTGGTGATATTCATGCATACAGAATGTCACTGTGGTATGAGCACACTGGAATCACTGAGGAATTGTTCTTAGAGCCAGAAAGTTTGTCATGTGTTAAGAGAATGCTGTCAATAGGGGATCACATGTGGGGAATCTACAGTAGTGAAGAAACTGTGGACATGGAAGGTGTGCACCTTGTAAGTTACCCTGTGAAAGTAACACAAGAAGGGTCTGTGAAGGATACGGTTGATGGTGGAGATCATTTTCCTGACACAAAATCTCCAGTGAAGGGGAAAAGATCAAAATTCTTAGCCCCTATCTTTACTACTTAA 2280 0.4338 MEEKPKLLIHGTIEATIFNATPYSPSFPFNCVCTNGKPAYVTINIDNNRVAKTTQEHERVWNQTFQIQCAHPEDSTTTITLKTSCSVLGKFHVQAKRLKEESLINGFFPLLMENGKPNPQLKLRFMLWFKPADMEPSWTKILSNGEFQGLRDATFPQRSNCQVKLYHDAHHSSTFHPPFDLCGAPRKLWEDVYKAIEGANYLIYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVAVRVMIWDDETSLPFIKNKGVMKTHDEDAFAYFKHTKVICRKCPRLHHEFPTLFAHHQKTITVDTRAPNSVRAREIMSFLGGVDLCDGRYDTEKHSLFQTLTEESHYHDFYQTNIAGASLNKGGPREPWHDAHASVTGDAAWDVLTNFEQRWTKQCDASLLVPANTLENLIPTCSSPPKERNWKVQVYRSIDHVSASQLFRKLTVERSIHEAYVEAIRRADRFVYIENQYFIGGCHLWQKDRHSGCRNLIPVEIALKVVSKIKARERFAVYIVIPMWPEGVPESEPVQDILHWTRETMIMMYTLIGEAIIESGEPGHPRDYLNFFCLANREKKGKEEYLSPHSPHPETQYWNAQKNRRFPVYVHSKIMIVDDIYILIGSANVNQRSMDGQRDTEIAIGAYQSQDGADHHIISRGDIHAYRMSLWYEHTGITEELFLEPESLSCVKRMLSIGDHMWGIYSSEETVDMEGVHLVSYPVKVTQEGSVKDTVDGGDHFPDTKSPVKGKRSKFLAPIFTT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00218 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Gma15g00218 759 SMART pld_4 296 333 IPR001736 GO:0003824
Gma15g00218 759 SMART pld_4 603 630 IPR001736 GO:0003824
Gma15g00218 759 Pfam C2 domain 39 110 IPR000008 -
Gma15g00218 759 Pfam Phospholipase D Active site motif 607 630 IPR001736 GO:0003824
Gma15g00218 759 Gene3D Endonuclease Chain A 420 652 - -
Gma15g00218 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 603 630 IPR001736 GO:0003824
Gma15g00218 759 PIRSF PLD_plant 3 759 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gma15g00218 759 SUPERFAMILY Phospholipase D/nuclease 146 406 - -
Gma15g00218 759 Gene3D Endonuclease Chain A 172 419 - -
Gma15g00218 759 PANTHER PHOSPHOLIPASE D 5 759 IPR015679 -
Gma15g00218 759 Pfam Phospholipase D C terminal 676 748 IPR024632 -
Gma15g00218 759 PANTHER PHOSPHOLIPASE D ALPHA 5 759 - -
Gma15g00218 759 SUPERFAMILY Phospholipase D/nuclease 422 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00218 Gma-Chr15 1917041 1920167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00218 31 759 Phospholipase D Gene Family (Wang group) AT1G55180 62.315 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00218 K01115 - gmx:100807431 1565.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00218 15 1917041 1920167 Gma15g00218 15 1917041 1920167 ECH
Gma15g00218 15 1917041 1920167 Gma07g00101 07 849709 853292 PCT
Gma15g00218 15 1917041 1920167 Gma08g01791 08 15955460 15959026 PCT
Gma07g00101 07 849709 853292 Gma15g00218 15 1917041 1920167 PCT
Gma08g01791 08 15955460 15959026 Gma15g00218 15 1917041 1920167 PCT