Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00215 ATGAGTCGAGAACAACAGAAGCGAGGGAAGCAAGAAAAAGGTTCTGATGGAGCTGAAAAGGTTATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCCCTAACTCATGTTGTGCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTACCTTCACAAAGTACAGGTCGAAGATTATGGGGTTTTCCAAGGTTTGCTGGCGACTGTGCCAATGGTCAAAAGAAGTCTACTTCAGGATCATCAAGTTCAGAACATAAGAGTGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCTAACAAGATAAATGTGAAGATTAAAATTGTTTCTGGATCACCCTGCGGAGCAGTGGCTGCGGAAGCCAAGAAATCCCAAGCCAATTGGGTCGTATTAGACAAACAGCTTAAACATGAGGAAAAACAATGCATGGAAGAGCTGCAGTGCAACATCGTGGTTATGAAGCATTCCCAACCCAAGGTACTCCGCTTGAATTTGGTTGGAACACAAAAGAAGGATTTTGAAGAATTATGTCCATTACCTTCTGAACAAATTGAGATGCCTGGAAAACAAACTAAGAAGAAGCATGATTCTTTAAATTCTATAAAAGGACCAGTTGTCACTCCAACTAGCAGCCCTGAGCTAGGGACACCATTTACTACAATTGAAGCTGGTACTTCTTCGGTTTCAAGCTCTGATCAAGGAACTTCACCATTCTTCATCTCTGAGATGAATGGTGGTGGTGAGTCAAAGAAAGAGGAAACTATCATAGAAAATCCAGAACTTGATGATTCTATATCAGACACAGATAGTGAAAATTTGTCCACATCTTCAGCAAGCTTGAGATTCCAGCCATGGATCACTGATTTACTTTTGCATCAACGATCATCTCAACCCAAGGAGGAAAGAACAGAGAGATCTTATAATAAGCTTCAATCATCTACCGCCAGAGCTTTGCTAGAAAAGTTCTCAAGACTTGATAGAGAAGCTGAAATTGAACTCTCAACCTATAAGACTGACTTCAATTTCAGTGGAAATGTAAGAGAAGCAGTGGCATTATCTAGAAATACCCCACCTGGTCCACCTCCCTTATGTTCAATCTGTCAACACAAAGCTCCTGTTTTTGGAAAACCTCCCAAATGGTTCAGCTATGCTGAATTGGAGCTTGCCACAGGTGGATTTTCAAAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGCTTCTTCCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTCTGCTCGGAGGTAGAAGTCCTGAGCTGTGCtcagcaccgaaatgttgttatgttgattgggttctgtatagaggataaaagaaggctattggtttacgagtACATATGTAACAGATCATTGGATTCTCATTTATATGGGAGACAGCGAGAACCATTAGAATGGACTGCCCGGCAAAaaattgctgttggagctgctcgagggttacgatatcttcatgaagagtgcagagtgggttgcattatccatcgtgacatgcggccaaacaacattcttatcactcatgattttgAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGTGACACAGGAGTGGAaactagagtaattggaacgtttgggtacttggctccagaatatgctcaaagcggccaaataactgaaaaggcagatgtttattCTTTCGGTGTGGTattggtggaacttgttacaggacgaaaggccgtggatctcaatcgaccgaagggacaacagtgtcttactgagtggGCACGGCCACTCTTGGAAGAATACGCCATTGAGGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCTGAACATGAGGTCTATTGCATGCTACATGCTGCCTCATTATGCATAAGGCGAGATCCTTATTCTAGACCACGCATGTCACAGGTTCTTCGAATACTGGAGGGTGACACGGTCATGGATCCGAATTACATTTCAACTCCCAGTTATGATGTGGGAAACCGGGGTGGTTGA 2100 0.36 MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSTGRRLWGFPRFAGDCANGQKKSTSGSSSSEHKSDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKSQANWVVLDKQLKHEEKQCMEELQCNIVVMKHSQPKVLRLNLVGTQKKDFEELCPLPSEQIEMPGKQTKKKHDSLNSIKGPVVTPTSSPELGTPFTTIEAGTSSVSSSDQGTSPFFISEMNGGGESKKEETIIENPELDDSISDTDSENLSTSSASLRFQPWITDLLLHQRSSQPKEERTERSYNKLQSSTARALLEKFSRLDREAEIELSTYKTDFNFSGNVREAVALSRNTPPGPPPLCSICQHKAPVFGKPPKWFSYAELELATGGFSKANFLAEGGFGSVHRGLLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNRSLDSHLYGRQREPLEWTARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEHEVYCMLHAASLCIRRDPYSRPRMSQVLRILEGDTVMDPNYISTPSYDVGNRGG 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00215 699 CDD USP_Like 20 144 - -
Gma15g00215 699 Pfam Protein kinase domain 410 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00215 699 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00215 699 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 697 - -
Gma15g00215 699 SUPERFAMILY Protein kinase-like (PK-like) 390 685 IPR011009 -
Gma15g00215 699 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Gma15g00215 699 MobiDBLite consensus disorder prediction 200 266 - -
Gma15g00215 699 Gene3D HUPs 4 172 IPR014729 -
Gma15g00215 699 MobiDBLite consensus disorder prediction 215 255 - -
Gma15g00215 699 Gene3D Transferase(Phosphotransferase) domain 1 482 686 - -
Gma15g00215 699 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Gma15g00215 699 CDD STKc_IRAK 412 678 - -
Gma15g00215 699 PANTHER OS01G0253100 PROTEIN 16 697 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00215 Gma-Chr15 1895345 1899254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00215 386 695 Trihelix Transcription Factor Family AT1G70460 52.500 6.97e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma15g00215 Pkinase 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00215 - - gmx:100804766 1392.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00215 15 1895345 1899254 Gma15g00215 15 1895345 1899254 ECH
Gma13g03151 13 45618792 45623014 Gma15g00215 15 1895345 1899254 GST
Gma15g00215 15 1895345 1899254 Gma07g00105 07 875174 879608 PCT
Gma15g00215 15 1895345 1899254 Gma08g01795 08 15977309 15982709 PCT
Gma07g00105 07 875174 879608 Gma15g00215 15 1895345 1899254 PCT
Gma08g01795 08 15977309 15982709 Gma15g00215 15 1895345 1899254 PCT