Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00213 ATGGCGACCGTACCAGGACAGCTCATATGGGAGGTCGTAAAGAAGAACAACTCTTTCTTGGTGAAAGAGTTCGGAAGGGGCACTCAGAGCGTGCAGTTCAGCAGAGAGCCCAACAATCTCTACAACCTCAACACTTTCAAGTACTCCGGTTTGGCGAACAAGAAAACTGTCACTGTTCAACCTGCGGGTAAAGACCAGTCTGTGTTGCTGGCAACAACCAAGACAAAGAAGCAAAACAAGCCTGCTGCTTTGCTTCACAAATCTGTCATGAAAAAGGAGTTCCGGAGGATGGCAAAGGCAGTGCAAAATCAGGTAGCAGATAACTACTACAGGCCTGATCTCAAAAAGGCAGCTCTGGCAAGGTTGAGCGCTGTCAATAGGAGCCTCAGAGTTGCTAAGTCTGGTGTGAAGAAGAGGAACAGACAGGCTGTGAAGGTCCCTAGCAGGAAGTGA 453 0.4879 MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVKVPSRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00213 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Gma15g00213 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Gma15g00213 150 Gene3D - 6 133 - -
Gma15g00213 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00213 Gma-Chr15 1829543 1831968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00213 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 73.427 7.34e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00213 K02903 - gmx:100500189 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03154 13 45672244 45675815 Gma15g00213 15 1829543 1831968 ECH
Gma15g00213 15 1829543 1831968 Gma15g00213 15 1829543 1831968 ECH
Gma13g03154 13 45672244 45675815 Gma15g00213 15 1829543 1831968 GST
Gma15g00213 15 1829543 1831968 Gma07g00120 07 1023810 1025525 PCT
Gma15g00213 15 1829543 1831968 Gma08g01814 08 16180449 16182603 PCT
Gma07g00120 07 1023810 1025525 Gma15g00213 15 1829543 1831968 PCT
Gma08g01814 08 16180449 16182603 Gma15g00213 15 1829543 1831968 PCT