Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00206 ATGGATGGAAAATGGAGATGCCATTGGGCTTGGAGCTGCACCTTGTGGTGTGTCCTTGCATATACCGTTTCAGAATTTACTGGAAAGTCCATAGTTATGGCCACAGGGAAGAACTCTATGCATCACAAACAAGGAAGAAGGAAACTAGATGATGTAACTGgttctatttgcattgactgtgggatagcagaaggccttgactatactgatgacaaaactcagattcattacacttcagatgcacagttcattggcactggaacaagcaaaagcatatcccacaagttcatttctgacacaccccaaagaactttcacaaatgtaagaagcttccctgaggggaaaaagaattgctacacgctacgacatccagaaggcagaaatactatttacttgataagagcttcgttcatgtatgggaactatgatgacttaaataagctgccacaatttgatctctatattggggttaatttatgggacactgtgatgtttgacaatgccactcatgtggtaatcaaggagattctacatgtgccatccttggatgaattatatgtttgtttattgaacactgataaaggaactccttttatatcagcactggaggtgaggcactttgaTCATTCCAGTTACAGAACAAACTCTAAACTCTTATCCCTCTATAAACGTTTTGACATTGGCTCAACAACCAATGAAATAGTGAGGTATGACAAAGATGATTACGATCGAATGTGGTATCCGTATAACTTACCTGATTCTACACCACTCAATACTTCCTTCACCGTCGACTCCTTGAACCATACTGCATATCACTTGCCATCGGCAGTAATGAAAACTGCTGTGAGGCCGACAAATGAAAATGATTCCCTGGAATTTGAATTTGACACTGGACAACCTACTTCAGAGTCTtatgtttacatgcactttgctgaaatcgaagtgcttaatgaaaatgaaagcagggcatttgacattacattgaatggaaaattatgggctgaatatgtaactcccacgtatttgcagtcaaatacaatagatggtaatcagtccattaggggaagtaagctcaagttctctatgcacaagaaaccaaattccacccatccacccattctaaatgcaatggagatttacattgttaaagaattcttgcattctcctacaaaccaagatgatgttaaggctatcatcaacatcaaatcgcattacaagttggcatcatcggtgggtaaatcctggcaaggagatccttgcgcaccatcgaaatactcttggaatggactcaactgcagcaataatggatataattcacccacaataactgcattatatctggcctccagtggattaggtggcacaataattgcatcatttttggagctcaaattcttagaatccttggatttatcaaacaatagcttaacaggacctctacctgatttttcacaactgcaacacttaaaggctctcaatttatcagggaatagactctcaggtcaaattccttcacttctcaaggaaagatcaaataatggttcacttttgctgagTGTGGATGGAAATCTGGATCTCTGCCAGGAGGGCCCATGTGAAGAGGATAAAATGAATATTGCCCCACTTGTTGCAGGCATTCTTTCAGTTGTACTCTTTTTCATTGTATTGGGTATTGTACTGAATATCATTTGGAGAAGGAGATGCAACAGAAAACCAGCATCAAAGCAAGCTGTGAGATTAAATGAAGAGGTTGTGCTGAAGACAAACAATACACAGTTCACATACTCTCAGATATCGACTattaccaataacttcgacaaaatgattgggaagggaggatgtggaattgtttatcttggttccttacaggatggcacacaggttgctgtcaaaatgctcttgccaaaatgtcctcagggatcacaacagtttcagactgaggctcaactcttaatgcgtgtgcatcacaagaacttagcttcctttgtcggatactgtaatgaagttggacacacaggcatcatctacgaatatatggcttatgggaacttggaagagtatctatcagATGCAAGGAGAGAACCATTAAGTTGGAGACAGAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTATCgagtacttgcatcatggctgcaagccgccaataattcatagagacattaagactgcaaacattttgctgaatgagaaaatgcaagcaaaagatatcttgatccagaatactacacatccagcaggctaa 2265 0.1391 MDGKWRCHWAWSCTLWCVLAYTVSEFTGKSIVMATGKNSMHHKQGRRKLDDVTGSICIDCGIAEGLDYTDDKTQIHYTSDAQFIGTGTSKSISHKFISDTPQRTFTNVRSFPEGKKNCYTLRHPEGRNTIYLIRASFMYGNYDDLNKLPQFDLYIGVNLWDTVMFDNATHVVIKEILHVPSLDELYVCLLNTDKGTPFISALEVRHFDHSSYRTNSKLLSLYKRFDIGSTTNEIVRYDKDDYDRMWYPYNLPDSTPLNTSFTVDSLNHTAYHLPSAVMKTAVRPTNENDSLEFEFDTGQPTSESYVYMHFAEIEVLNENESRAFDITLNGKLWAEYVTPTYLQSNTIDGNQSIRGSKLKFSMHKKPNSTHPPILNAMEIYIVKEFLHSPTNQDDVKAIINIKSHYKLASSVGKSWQGDPCAPSKYSWNGLNCSNNGYNSPTITALYLASSGLGGTIIASFLELKFLESLDLSNNSLTGPLPDFSQLQHLKALNLSGNRLSGQIPSLLKERSNNGSLLLSVDGNLDLCQEGPCEEDKMNIAPLVAGILSVVLFFIVLGIVLNIIWRRRCNRKPASKQAVRLNEEVVLKTNNTQFTYSQISTITNNFDKMIGKGGCGIVYLGSLQDGTQVAVKMLLPKCPQGSQQFQTEAQLLMRVHHKNLASFVGYCNEVGHTGIIYEYMAYGNLEEYLSDARREPLSWRQRIQIAVDAAQGIEYLHHGCKPPIIHRDIKTANILLNEKMQAKDILIQNTTHPAG 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00206 754 Gene3D Ribonuclease Inhibitor 393 518 IPR032675 -
Gma15g00206 754 Gene3D Transferase(Phosphotransferase) domain 1 679 744 - -
Gma15g00206 754 Pfam Leucine rich repeat 441 499 IPR001611 GO:0005515
Gma15g00206 754 ProSiteProfiles Protein kinase domain profile. 603 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00206 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Gma15g00206 754 Gene3D - 223 382 - -
Gma15g00206 754 Pfam Protein tyrosine and serine/threonine kinase 605 742 IPR001245 GO:0004672|GO:0006468
Gma15g00206 754 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 35 742 - -
Gma15g00206 754 Gene3D Phosphorylase Kinase; domain 1 585 678 - -
Gma15g00206 754 SMART serkin_6 603 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00206 754 PANTHER OS07G0107800 PROTEIN-RELATED 35 742 - -
Gma15g00206 754 ProSiteProfiles Leucine-rich repeat profile. 465 487 IPR001611 GO:0005515
Gma15g00206 754 PRINTS Leucine-rich repeat signature 466 479 - -
Gma15g00206 754 PRINTS Leucine-rich repeat signature 486 499 - -
Gma15g00206 754 SUPERFAMILY Protein kinase-like (PK-like) 583 742 IPR011009 -
Gma15g00206 754 ProSiteProfiles Leucine-rich repeat profile. 488 510 IPR001611 GO:0005515
Gma15g00206 754 SUPERFAMILY L domain-like 392 510 - -
Gma15g00206 754 Pfam Malectin-like domain 58 381 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00206 Gma-Chr15 1666689 1670970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00206 48 742 Receptor kinase-like Gene Family AT2G19210 47.226 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma15g00206 Malectin_like 2.2e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00206 - - gmx:100791717 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00206 15 1666689 1670970 Gma15g00206 15 1666689 1670970 ECH