Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00199 ATGGGCAAAGCTACAAGGTGGTTGAAGGGGTTGTTGGGAAAGAAGAAAGAGAAGGACTACCGTGGCTATTCGGGCTCATTGGATCTTGACAAGAGGGAAAAAAAACAATCGGAGAAGGATGAAGTGAGTCACATTACTCCAACCAGTGTTACCACCTTTGATCGAACTAGGTTCAGATCCTATGCTGCCCCAAAAGAGAAGAACAAGCACTCCATTGATTTGGCTGTTGTGAGATCAAAAAGCTGTGACAGAGGCAACTTACTTATTGGAAGCAGGGAGGGCTGGGCTGCTGTGTTGATTCAATCCTTTTTCAGAGGTTATTTGGCGCGAAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATCTGGTTCGAAAAAGGGTTGCTGCAACTCTTCACAGTGTTCAAGCTATGTTAAGAGCTCAAGCTGTTGCTCGATCTGTGCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCACAAACTCCTTCCAGAAAATATATGCAACGGTTTGATGAAGCAAGAAATTATCAATTACACAATAGAAGAGTACCTATATACTGTAAGGCACCCTTTAATGGATTTGATGAGAGTCAAAAAGTTGTTGAGGTTGACACTCACATGCCACATTCAAGTAGTAGGAGCATTAACACTGCAATGTCAGAATGTGGAGAAGACTTGCACTATCAAGCAATGTCATCCTCTCTTGGTTGTCCAATTCAAGGTCGAATCTCACTTCACGAGAGGCAACACCCTCAAGAGTTTGAATGGCTTTTCAATGTTGATGAAGGTAATAACAAGTTCTCCACAGCACACAACACGCCTCGTTTACCAAAATGCATGCCACCAGGTACTCCAGTGAAGAGTATTTGTGGAAAAACCTTCTTTAGGCCTTGCTCCAATTTCCCTAACTACATGGCCAACACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGGCCTGAACTCAAGAAAAGGCTTTCAATCAATGAAATGATAGCAGCAAGAAATAGTTTTAGTGGTGTTAGAATGCAGTGGTCGTCATCCAACCCGAAAACTCAAGAAGATTGCTGCTTTTTTGAAAGGGTTATTTAG 1137 0.4283 MGKATRWLKGLLGKKKEKDYRGYSGSLDLDKREKKQSEKDEVSHITPTSVTTFDRTRFRSYAAPKEKNKHSIDLAVVRSKSCDRGNLLIGSREGWAAVLIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSVQAMLRAQAVARSVRARRSMDKENRFHPQTPSRKYMQRFDEARNYQLHNRRVPIYCKAPFNGFDESQKVVEVDTHMPHSSSRSINTAMSECGEDLHYQAMSSSLGCPIQGRISLHERQHPQEFEWLFNVDEGNNKFSTAHNTPRLPKCMPPGTPVKSICGKTFFRPCSNFPNYMANTHSSKAKLRSHSAPKQRPELKKRLSINEMIAARNSFSGVRMQWSSSNPKTQEDCCFFERVI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00199 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 136 IPR027417 -
Gma15g00199 378 Pfam Protein of unknown function (DUF4005) 278 356 IPR025064 -
Gma15g00199 378 Gene3D - 20 118 - -
Gma15g00199 378 SMART iq_5 115 136 IPR000048 GO:0005515
Gma15g00199 378 SMART iq_5 92 114 IPR000048 GO:0005515
Gma15g00199 378 ProSiteProfiles IQ motif profile. 96 121 IPR000048 GO:0005515
Gma15g00199 378 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Gma15g00199 378 Pfam IQ calmodulin-binding motif 120 134 IPR000048 GO:0005515
Gma15g00199 378 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Gma15g00199 378 PANTHER IQ-DOMAIN 5-RELATED 1 378 - -
Gma15g00199 378 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00199 Gma-Chr15 1626806 1628463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00199 1 358 IQD Protein Family AT3G16490 41.191 1.86e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00199 - - gmx:100806729 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00199 15 1626806 1628463 Gma15g00199 15 1626806 1628463 ECH
Gma13g03166 13 45782604 45784257 Gma15g00199 15 1626806 1628463 GST
Gma15g00199 15 1626806 1628463 Gma07g00142 07 1192929 1194851 PCT
Gma15g00199 15 1626806 1628463 Gma08g01838 08 16495056 16496852 PCT
Gma07g00142 07 1192929 1194851 Gma15g00199 15 1626806 1628463 PCT
Gma08g01838 08 16495056 16496852 Gma15g00199 15 1626806 1628463 PCT