Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00198 ATGGATGAAAGGTCAAGAAACGAGGCATCTCCTCAGCTGTTAGATTTGATCTCAAACGAGAGAGAGTGGCAGATGAACAAGAGAAACGAAGGAAAATCCTCAGAAGAAAGAAAGCTTGAACTGAGGCTTGGTCCACCTGGTGAAGACTGGTCTCTGGGCGGTAAAATGAAGAACACAGAAAGAGAAGAATCTCTTCTCTCTCTTGGTTGCTTCTCTCCTAACAATGGGTTCCAGAGCAAGGCTTCTCCATGGCCAAACTACCACCACCACCACCAGGGTAACAACAACAAAGCCTCTTCTTCATCATTTCTTCAGTGCCCTAAGGTTGTGGTAGAGTTGCAGAATGGTGGTGATGGCAAAGTATTCTCTCCCTCTTCTGCAAATACAGCTGTGTCCCAGCCCAACACCTCTCAGAAAAGAACTGCTCCTGCTCCAGTGGTGGGGTGGCCCCCAATTCGTTCCTTCAGGAAGAACCTTGCAAGCAGCAGCAGTGCTTCTAAGCCAACTCCTGAGTCTCAGGCTGAGCAGCACAACAAGGTTGCTGGTAAAAAACCTGTTGACAACTATGCTAATAATAAAGGTTTGTTTGTCAAGATCAACATGGATGGTGTTCCTATAGGGAGAAAAGTGGACCTCAATGCCTATGACAGCTATGAAAATCTCTCTTCCGCCGTGGACGAGCTATTCAGAGGTCTTCTTGCTGCTCAAAGAGATTCCTCTGCTGGTGGAGTTCACAACAAGCAGGAGGAAGAGAAAGCAATTACGGGGTTATTGGATGGAAGTGGAGAGTATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTTGTATCAACAGTGAAGAGGCTACGAGTGTTGAAGAGTTCTGAGCTTTCTGCTTTTACCCTTGGGAGTAAGCAAGACAAGATACCCCTTGACTCAGCAATGAAATGA 963 0.4642 MDERSRNEASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNTEREESLLSLGCFSPNNGFQSKASPWPNYHHHHQGNNNKASSSSFLQCPKVVVELQNGGDGKVFSPSSANTAVSQPNTSQKRTAPAPVVGWPPIRSFRKNLASSSSASKPTPESQAEQHNKVAGKKPVDNYANNKGLFVKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSKQDKIPLDSAMK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00198 320 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 311 IPR003311 GO:0005634|GO:0006355
Gma15g00198 320 MobiDBLite consensus disorder prediction 21 44 - -
Gma15g00198 320 Gene3D - 188 309 - -
Gma15g00198 320 MobiDBLite consensus disorder prediction 1 58 - -
Gma15g00198 320 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 6 311 - -
Gma15g00198 320 SUPERFAMILY CAD & PB1 domains 190 295 - -
Gma15g00198 320 MobiDBLite consensus disorder prediction 156 176 - -
Gma15g00198 320 Pfam AUX/IAA family 39 303 IPR033389 -
Gma15g00198 320 MobiDBLite consensus disorder prediction 125 185 - -
Gma15g00198 320 MobiDBLite consensus disorder prediction 125 142 - -
Gma15g00198 320 ProSiteProfiles PB1 domain profile. 194 298 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00198 Gma-Chr15 1602234 1605496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00198 198 309 B3 DNA Binding Superfamily AT4G23980 33.929 5.68e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma15g00198 AUX_IAA 1.8e-72 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00198 K14484 - gmx:100804593 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03168 13 45808994 45811705 Gma15g00198 15 1602234 1605496 ECH
Gma15g00198 15 1602234 1605496 Gma15g00198 15 1602234 1605496 ECH
Gma13g03168 13 45808994 45811705 Gma15g00198 15 1602234 1605496 GST
Gma15g00198 15 1602234 1605496 Gma07g00144 07 1223272 1226557 PCT
Gma15g00198 15 1602234 1605496 Gma08g01841 08 16523281 16525931 PCT
Gma07g00144 07 1223272 1226557 Gma15g00198 15 1602234 1605496 PCT
Gma08g01841 08 16523281 16525931 Gma15g00198 15 1602234 1605496 PCT