Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00190 ATGACTCGGCGCTGCTCCCACTGCACCAACAACGGCCACAACTCCCGGACATGCCCGTCGCGGGGAGGGGGCGGCGTCAAGCTGTTCGGGGTGAGGCTGACGGATGGATCAATCATAAAGAAGAGCGCTAGCATGGGGAACCTTAACCTCTCCTCCTCCTCCTCCGCCGCCGCCGCACATCTGCAATTCCGTTCATCTCCTTCTTCTTCCAACCTCCCCGCGGCCTCATCGCCCAATCCAAGCTCCCCGTGCTCCGACCCGCCCCAAGGCTACTTGTCCGATGACCCCGCCCACGTCTCCACCTTCGCTAACCGCCGCGGTGATAGAAAAAAAGGTGTGCCATGGACTGAAGAAGAACATCGGCTGTTCTTAATTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGGATAGCACGTAATTTTGTTGTATCAAGAACCCCTACTCAAGTAGCAAGTCATGCCCAAAAGTATTTTATCCGGCAGAGTCATGCTACCAGGAGAAAGAGACGTTCCAGCCTTTTTGACATGGTTCCAGATATGTCTTCAGATCAACCTTCTGTGCCAGAAGAACAAGTGCTGCTTCCACCTCCCGAGAACTCACAACCTTGCAATGAAAAATCACAGCCCTCATTAAATCTCTCCCTCAAATCAGAATTTGAACCTATGGAGACTACTTCTCAAGAAAATGTGCAACAGACCAATGAACCTATGATGGGATCAAACAGATTGACACCAATGGCTCCTCATGGATGCTTTCCCGCATATTTACCTGTTCCTTTTCCCATGTGGCCATCAACTTGGGTTCACCCCTTTGAAGAAGTTAAGGGAGGAGAGACATGCCACCATCAGATCCACAAGCCAATCCCAGTCATTCCAAAGGAACCTGTTAATGTTGACGAACTTGTGGGAATGTCTCATCTAAGCATTGGGGAAGCACAGGTACGTGATAGAGAGCCTTCCCCTCTTTCCATAAAGTTGTTAGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGTCCCGGTTGGTAGTTCGGATTTAAACAATGGCAAGGACAACGCAATTCAAGCTGTCTGA 1080 0.5083 MTRRCSHCTNNGHNSRTCPSRGGGGVKLFGVRLTDGSIIKKSASMGNLNLSSSSSAAAAHLQFRSSPSSSNLPAASSPNPSSPCSDPPQGYLSDDPAHVSTFANRRGDRKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSHATRRKRRSSLFDMVPDMSSDQPSVPEEQVLLPPPENSQPCNEKSQPSLNLSLKSEFEPMETTSQENVQQTNEPMMGSNRLTPMAPHGCFPAYLPVPFPMWPSTWVHPFEEVKGGETCHHQIHKPIPVIPKEPVNVDELVGMSHLSIGEAQVRDREPSPLSIKLLGEPSRQSAFHANVPVGSSDLNNGKDNAIQAV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00190 359 Gene3D - 113 164 - -
Gma15g00190 359 SUPERFAMILY Homeodomain-like 109 163 IPR009057 -
Gma15g00190 359 Pfam Myb-like DNA-binding domain 114 159 IPR001005 -
Gma15g00190 359 MobiDBLite consensus disorder prediction 1 25 - -
Gma15g00190 359 MobiDBLite consensus disorder prediction 61 97 - -
Gma15g00190 359 MobiDBLite consensus disorder prediction 177 211 - -
Gma15g00190 359 SMART sant 111 161 IPR001005 -
Gma15g00190 359 MobiDBLite consensus disorder prediction 1 18 - -
Gma15g00190 359 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 110 162 IPR006447 GO:0003677
Gma15g00190 359 MobiDBLite consensus disorder prediction 340 359 - -
Gma15g00190 359 CDD SANT 114 159 IPR001005 -
Gma15g00190 359 PANTHER TRANSCRIPTION FACTOR KUA1 1 353 - -
Gma15g00190 359 MobiDBLite consensus disorder prediction 61 79 - -
Gma15g00190 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 163 IPR017930 -
Gma15g00190 359 ProSiteProfiles SANT domain profile. 115 163 IPR017884 -
Gma15g00190 359 ProSiteProfiles Myb-like domain profile. 107 159 IPR001005 -
Gma15g00190 359 PANTHER OS01G0187900 PROTEIN 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00190 Gma-Chr15 1532216 1535485 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma15g00190 Myb_DNA-binding 8.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00190 - - gmx:778032 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00190 15 1532216 1535485 Gma15g00190 15 1532216 1535485 ECH
Gma13g03175 13 45884984 45888461 Gma15g00190 15 1532216 1535485 GST