Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00180 ATGACCGAAACAACAAGGTGTCACGAAACTCCTAGCAGCAGCACCAGCACCAGCAACTCTTCCACTTCAAAACCCCCGAAACGGAACAAGACAGAAAAACAGAGCAAAGCAAAGAGAAACAGAGACCCCACCAAgcatcccgattaccacggcgttcgaatgcgcaattggggcaaatgggtatcagaaattcgcgagccgcgcaagaaatcacgcatctggctcggaacttttgccacccctgaaatggcggcacgtgcacacgacgtggcggctttgagcataaaaggccacaccgcgattctcaacttccctaacatagtaaacatgcttcccagacccgtcacgtgtgccccacgtgacatccaagccgcggccgcggaagccgccgcgatggtggAGTTCGACCGTGAGGGTTCGGAGGCAGAGTCGTCGGAGCTGAGCGAGATTGTGGAGCTTCCGAACATAGAAGAGAGCTTCGAGTCGGTTGAGTCGAGAAGTGAGTTCACGTTGATCGACTCGGTAGATAGTTGGGTGTACCCTCCTCCAATGGCGGTGGGGAGCATTGGTGACATGATGATGCTTGGGGAACACGAGTGTGGATTATTCCAATTTGCGACCGATCACCAAAAAACATGTTCCGTTTAG 648 0.2978 MTETTRCHETPSSSTSTSNSSTSKPPKRNKTEKQSKAKRNRDPTKHPDYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGHTAILNFPNIVNMLPRPVTCAPRDIQAAAAEAAAMVEFDREGSEAESSELSEIVELPNIEESFESVESRSEFTLIDSVDSWVYPPPMAVGSIGDMMMLGEHECGLFQFATDHQKTCSV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00180 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 214 - -
Gma15g00180 215 MobiDBLite consensus disorder prediction 1 51 - -
Gma15g00180 215 Pfam AP2 domain 47 98 IPR001471 GO:0003700|GO:0006355
Gma15g00180 215 MobiDBLite consensus disorder prediction 1 25 - -
Gma15g00180 215 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Gma15g00180 215 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Gma15g00180 215 SUPERFAMILY DNA-binding domain 49 105 IPR016177 GO:0003677
Gma15g00180 215 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Gma15g00180 215 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 214 - -
Gma15g00180 215 CDD AP2 47 106 IPR001471 GO:0003700|GO:0006355
Gma15g00180 215 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Gma15g00180 215 MobiDBLite consensus disorder prediction 26 51 - -
Gma15g00180 215 Gene3D AP2/ERF domain 48 107 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00180 Gma-Chr15 1436507 1437415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00180 19 188 AP2-EREBP Transcription Factor Family AT5G11590 52.284 2.71e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma15g00180 AP2 7.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00180 K09286 - gmx:100787471 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00180 15 1436507 1437415 Gma15g00180 15 1436507 1437415 ECH