Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00169 ATGAGTAGGGAGTTGATCACGATTCTGAATCCAAAAGGCTGCCTTGGATTTTGGTTTATGGTCTCTATCAGGATGCGGCTCAAGCAGTTGGTGTGCAGTAGATTATCATTTCAGTTTGGTCCAGCGGGGGAGGAGGATATGAGGCAATGGATGACTGTTCGAGGCTCTATACTGGTTTTGTTTTATTTCAAAGGGACTTCGTTTTATTTAGTTGAAATGGTTATCAGAACTCTCAAACCTTTAGCCAAGGCTTGTTTGGGTGTACTGTACATACAAGGAAATATCACAAAGGAAACTCTTCCAGTGCAGCAAATGATGGTTGATAACCCTAACTGGTGGAGCATGCATCAACAACCTTCTTTGATCCCTCCCCAATATGTGTTTCCTCCTTCTTCAATTCCTTTTAATTCTTTGACTGAAAATCAAGAGCCTCCTCAGTCATGGAGTCAACTGTTTTTTACTGGATTACCGGGAGAAGAAGAGAAACTTGGGCCTAAGAAGTTGGAAAACTGGAATGTCCAAGATCTTAATACTGCTTCTAGAGTTCCATTTCTTGATGTAATAAGGCAACAAGTTTCTCAAAGGGGCAATTTGTACGACCACGGGCCATCTTGGTCACATATGGTGCCTGTTTCTTCCCCCGTGTCTTGTGTCACTAGCTTCAGTAGTAATAATATATTGGATTTCACTTATAACAAGTCAGATCATAGGAGAAATCTACAACAAGACCAAATATCCAAGTGTAATAGCACAGCCACTGTTGGAGTTTGTAAAAAGGCTAGGGTTCAGCCATCTTCAAGCCAAGCACCTCTCAAGGTGCGGAAGGAGAAGCTAGGTGATAGAATAACAACCCTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCCTGTTAGAAGCCATAGGATATATAAGGTTCCTACAGGGCCAAATTGAGGCACTCAGCTCTCCTTACTTGGGCAGTGCATCAAAAAACATGAGGAATCAACAGTCTGTACATGGAGAAAGAAATTCTGTTCCAGAGGACCCCGGTCAGCTGTTGAATGACAATAATATTGGCCTGAAAAGAAAGGGAGCTCCGAACCAGGATGCGGAAGATCATAAAGCTAAGGATTTGAAGAGTAGAGGGTTGTGCTTGGTCCCGGTGTCTTGTACCCAGAATATGCATGTTGGAAGCTATTACTGGGCGCCCGCATACGGCAGAGGATTTTAA 1224 0.4322 MSRELITILNPKGCLGFWFMVSIRMRLKQLVCSRLSFQFGPAGEEDMRQWMTVRGSILVLFYFKGTSFYLVEMVIRTLKPLAKACLGVLYIQGNITKETLPVQQMMVDNPNWWSMHQQPSLIPPQYVFPPSSIPFNSLTENQEPPQSWSQLFFTGLPGEEEKLGPKKLENWNVQDLNTASRVPFLDVIRQQVSQRGNLYDHGPSWSHMVPVSSPVSCVTSFSSNNILDFTYNKSDHRRNLQQDQISKCNSTATVGVCKKARVQPSSSQAPLKVRKEKLGDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGSASKNMRNQQSVHGERNSVPEDPGQLLNDNNIGLKRKGAPNQDAEDHKAKDLKSRGLCLVPVSCTQNMHVGSYYWAPAYGRGF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00169 407 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 112 395 - -
Gma15g00169 407 Gene3D - 272 337 IPR036638 GO:0046983
Gma15g00169 407 MobiDBLite consensus disorder prediction 326 340 - -
Gma15g00169 407 MobiDBLite consensus disorder prediction 326 372 - -
Gma15g00169 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 272 323 IPR036638 GO:0046983
Gma15g00169 407 CDD bHLH_AtbHLH_like 272 319 IPR045239 -
Gma15g00169 407 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 112 395 - -
Gma15g00169 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 262 311 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00169 Gma-Chr15 1361403 1369130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00169 98 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 37.719 3.81e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00169 - - gmx:100783401 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00169 15 1361403 1369130 Gma15g00169 15 1361403 1369130 ECH